RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
SH3PXD2A-201ENST00000315994 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
SH3PXD2A-201ENST00000315994 KRTAP10-9P60411 292 aa9.59□□□□□ -0.87
SH3PXD2A-201ENST00000315994 SVIPQ8NHG7 77 aa9.59□□□□□ -0.87
SH3PXD2A-201ENST00000315994 CARD19Q96LW7 228 aa9.58□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NDUFA1O15239 70 aa9.58□□□□□ -0.88
SH3PXD2A-201ENST00000315994 CXCL5P42830 114 aa9.58□□□□□ -0.88
SH3PXD2A-201ENST00000315994 SPATA12Q7Z6I5 190 aa9.58□□□□□ -0.88
SH3PXD2A-201ENST00000315994 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 DSCR8Q96T75 97 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 ADAMTS20P59510 1910 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 P0DMU3 169 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 FOXI1Q12951 378 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
SH3PXD2A-201ENST00000315994 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 TNCP24821 2201 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 CSPG4Q6UVK1 2322 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 IGHV1-58A0A0C4DH39 117 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NOTCH2Q04721 2471 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 FXYD2P54710 66 aa9.56□□□□□ -0.88
SH3PXD2A-201ENST00000315994 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
SH3PXD2A-201ENST00000315994 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
SH3PXD2A-201ENST00000315994 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
SH3PXD2A-201ENST00000315994 Q6ZUT4 128 aa9.55□□□□□ -0.88
SH3PXD2A-201ENST00000315994 A4D1N5 150 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 CFAP126Q5VTH2 177 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NDUFA7O95182 113 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 DEFB105AQ8NG35 78 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 U3KQK5 164 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 MIFP14174 115 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 H7C423 109 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 DCANP1Q8TF63 244 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 PIEZO2Q9H5I5 2752 aa9.54□□□□□ -0.88
SH3PXD2A-201ENST00000315994 KLLNB2CW77 178 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 CEMP1Q6PRD7 247 aaPredicted RBP9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 TTTY13Q9BZ97 58 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 RS1O15537 224 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NDUFS5O43920 106 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 HCFC1P51610 2035 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 TRACP01848 142 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 HIST2H2BDQ6DRA6 164 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 TEN1Q86WV5 123 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 PTPN13Q12923 2485 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
SH3PXD2A-201ENST00000315994 M0QY20 66 aa9.52□□□□□ -0.88
SH3PXD2A-201ENST00000315994 LINC00482Q8N8I6 264 aa9.52□□□□□ -0.88
SH3PXD2A-201ENST00000315994 UBL5Q9BZL1 73 aa9.52□□□□□ -0.88
SH3PXD2A-201ENST00000315994 DEFB131BA0A096LNP1 70 aa9.52□□□□□ -0.89
SH3PXD2A-201ENST00000315994 ORMDL1Q9P0S3 153 aa9.52□□□□□ -0.89
SH3PXD2A-201ENST00000315994 H0YGX0 51 aa9.52□□□□□ -0.89
SH3PXD2A-201ENST00000315994 BRI3O95415 125 aa9.52□□□□□ -0.89
SH3PXD2A-201ENST00000315994 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TRBV6-4A0A1B0GX49 114 aa9.51□□□□□ -0.89
SH3PXD2A-201ENST00000315994 PRR9Q5T870 116 aa9.51□□□□□ -0.89
SH3PXD2A-201ENST00000315994 MRPS12O15235 138 aaKnown RBP9.5□□□□□ -0.89
SH3PXD2A-201ENST00000315994 RNASE3P12724 160 aaKnown RBP9.5□□□□□ -0.89
SH3PXD2A-201ENST00000315994 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
SH3PXD2A-201ENST00000315994 DAND5Q8N907 189 aa9.5□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
SH3PXD2A-201ENST00000315994 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
SH3PXD2A-201ENST00000315994 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
SH3PXD2A-201ENST00000315994 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.49□□□□□ -0.89
SH3PXD2A-201ENST00000315994 SPANXB1Q9NS25 103 aaPredicted RBP9.49□□□□□ -0.89
SH3PXD2A-201ENST00000315994 C11orf21Q9P2W6 132 aa9.49□□□□□ -0.89
SH3PXD2A-201ENST00000315994 RAI1Q7Z5J4 1906 aaPredicted RBP9.49□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TRAV10A0A0B4J240 114 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 REG3AQ06141 175 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 J3KT08 172 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 HAMPP81172 84 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TLN1Q9Y490 2541 aaKnown RBP9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 IGHV4-4A0A075B6R2 117 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 ANKRD29Q8N6D5 301 aa9.48□□□□□ -0.89
SH3PXD2A-201ENST00000315994 MT-ATP8P03928 68 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 LINC00269Q8N2A0 174 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 NAV3Q8IVL0 2385 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 CRYGDP07320 174 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 MIR7-3HGQ8N6C7 128 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 SMR3AQ99954 134 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 IGLV4-3A0A075B6K6 122 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TNRC6BQ9UPQ9 1833 aaKnown RBP9.46□□□□□ -0.89
SH3PXD2A-201ENST00000315994 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
SH3PXD2A-201ENST00000315994 NDUFB1O75438 58 aa9.46□□□□□ -0.9
SH3PXD2A-201ENST00000315994 PLXNB1O43157 2135 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms