RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
TRIM35-201ENST00000305364 SIRPDQ9H106 197 aa9.75□□□□□ -0.85
TRIM35-201ENST00000305364 Q8NA96 180 aa9.75□□□□□ -0.85
TRIM35-201ENST00000305364 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
TRIM35-201ENST00000305364 CITED1Q99966 193 aa9.75□□□□□ -0.85
TRIM35-201ENST00000305364 BOD1L1Q8NFC6 3051 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 IGLV4-3A0A075B6K6 122 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 Q6ZSV7 163 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 ZNF575Q86XF7 245 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 A0A1W2PRX2 142 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 H7C423 109 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 MSMBP08118 114 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 Q9H8V8 135 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 PEMTQ9UBM1 199 aa9.74□□□□□ -0.85
TRIM35-201ENST00000305364 TMEM126AQ9H061 195 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 M0QY20 66 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 ELANEP08246 267 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 BAALC-AS2P0C853 105 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 HECTD1Q9ULT8 2610 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 BLCAPP62952 87 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 MIAQ16674 131 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 U3KQE9 123 aa9.73□□□□□ -0.85
TRIM35-201ENST00000305364 UBE2L6O14933 153 aa9.72□□□□□ -0.85
TRIM35-201ENST00000305364 Q6Q795 121 aa9.72□□□□□ -0.85
TRIM35-201ENST00000305364 SBSPONQ8IVN8 264 aa9.72□□□□□ -0.85
TRIM35-201ENST00000305364 RNASE1P07998 156 aaKnown RBP9.72□□□□□ -0.85
TRIM35-201ENST00000305364 LINC01356Q8N9X3 169 aa9.72□□□□□ -0.85
TRIM35-201ENST00000305364 ACYP1P07311 99 aa9.71□□□□□ -0.85
TRIM35-201ENST00000305364 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.85
TRIM35-201ENST00000305364 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.85
TRIM35-201ENST00000305364 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
TRIM35-201ENST00000305364 CRPP02741 224 aa9.71□□□□□ -0.86
TRIM35-201ENST00000305364 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.86
TRIM35-201ENST00000305364 ODF3Q96PU9 254 aa9.71□□□□□ -0.86
TRIM35-201ENST00000305364 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
TRIM35-201ENST00000305364 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
TRIM35-201ENST00000305364 NHLRC4P0CG21 123 aaPredicted RBP9.69□□□□□ -0.86
TRIM35-201ENST00000305364 DEFB131AP59861 70 aa9.69□□□□□ -0.86
TRIM35-201ENST00000305364 MAPK1IP1LQ8NDC0 245 aa9.69□□□□□ -0.86
TRIM35-201ENST00000305364 LST1O00453 97 aa9.68□□□□□ -0.86
TRIM35-201ENST00000305364 LINC00158P58513 81 aa9.68□□□□□ -0.86
TRIM35-201ENST00000305364 HIST1H4AP62805 103 aaKnown RBP9.68□□□□□ -0.86
TRIM35-201ENST00000305364 ZNF415Q09FC8 603 aa9.68□□□□□ -0.86
TRIM35-201ENST00000305364 ADAMTSL4-AS1Q5T5F5 129 aa9.68□□□□□ -0.86
TRIM35-201ENST00000305364 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
TRIM35-201ENST00000305364 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 LOC400499M0QZD8 3231 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 PROK1P58294 105 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 VSIG2Q96IQ7 327 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 KLLNB2CW77 178 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 LINC00643Q86TS7 51 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 CDKN2A-AS1Q9UH64 79 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
TRIM35-201ENST00000305364 TACC2O95359 2948 aa9.66□□□□□ -0.86
TRIM35-201ENST00000305364 LINC00315P59091 139 aa9.66□□□□□ -0.86
TRIM35-201ENST00000305364 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
TRIM35-201ENST00000305364 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
TRIM35-201ENST00000305364 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
TRIM35-201ENST00000305364 ADGRG4Q8IZF6 3080 aa9.65□□□□□ -0.86
TRIM35-201ENST00000305364 A0A0J9YX75 114 aa9.65□□□□□ -0.86
TRIM35-201ENST00000305364 KALRNO60229 2985 aa9.65□□□□□ -0.86
TRIM35-201ENST00000305364 M0QXV9 152 aa9.65□□□□□ -0.86
TRIM35-201ENST00000305364 Q9HAA7 133 aa9.65□□□□□ -0.86
TRIM35-201ENST00000305364 IGKV3D-7A0A0C4DH55 119 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 EDN2P20800 178 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 TRGV1A0A0A0MS02 117 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 IGHV4-38-2P0DP08 117 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 STHQ8IWL8 128 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 PAX4O43316 350 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 HERVK_113P63121 156 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 ADORA2A-AS1P86434 159 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 H3BUA1 57 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 COX7A2LO14548 114 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 TRACP01848 142 aa9.64□□□□□ -0.87
TRIM35-201ENST00000305364 MAP1AP78559 2803 aaPredicted RBP9.63□□□□□ -0.87
TRIM35-201ENST00000305364 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 J3QKU1 62 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 UQCRQO14949 82 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 NXPH4O95158 308 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
TRIM35-201ENST00000305364 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
TRIM35-201ENST00000305364 MUC4Q99102 2169 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 SOCS3O14543 225 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
TRIM35-201ENST00000305364 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
TRIM35-201ENST00000305364 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
TRIM35-201ENST00000305364 IGHG2P01859 326 aa9.62□□□□□ -0.87
TRIM35-201ENST00000305364 AMELXQ99217 191 aa9.62□□□□□ -0.87
TRIM35-201ENST00000305364 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
TRIM35-201ENST00000305364 MRPS36P82909 103 aaKnown RBP9.62□□□□□ -0.87
TRIM35-201ENST00000305364 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
TRIM35-201ENST00000305364 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms