RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 A0A0B4J2C4 111 aa12.19□□□□□ -0.46
BRD3-201ENST00000303407 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
BRD3-201ENST00000303407 NRACQ8N912 160 aa12.18□□□□□ -0.46
BRD3-201ENST00000303407 PROK1P58294 105 aa12.18□□□□□ -0.46
BRD3-201ENST00000303407 PSMG3-AS1Q96PY0 264 aa12.18□□□□□ -0.46
BRD3-201ENST00000303407 ETDCA0A1B0GVM5 59 aa12.18□□□□□ -0.46
BRD3-201ENST00000303407 LECT2O14960 151 aa12.18□□□□□ -0.46
BRD3-201ENST00000303407 ZNF22P17026 224 aaPredicted RBP12.17□□□□□ -0.46
BRD3-201ENST00000303407 PTH2Q96A98 100 aa12.17□□□□□ -0.46
BRD3-201ENST00000303407 MED13LQ71F56 2210 aa12.17□□□□□ -0.46
BRD3-201ENST00000303407 IGLV1-40P01703 118 aa12.17□□□□□ -0.46
BRD3-201ENST00000303407 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
BRD3-201ENST00000303407 SPTAN1Q13813 2472 aaKnown RBP12.17□□□□□ -0.46
BRD3-201ENST00000303407 hADV29S1A0JD25 119 aa12.16□□□□□ -0.46
BRD3-201ENST00000303407 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
BRD3-201ENST00000303407 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
BRD3-201ENST00000303407 H3BT86 120 aa12.15□□□□□ -0.46
BRD3-201ENST00000303407 TIRAPP58753 221 aa12.15□□□□□ -0.46
BRD3-201ENST00000303407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.461e-7■■■□□ 19.1
BRD3-201ENST00000303407 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
BRD3-201ENST00000303407 CDKN2A-AS1Q9UH64 79 aa12.14□□□□□ -0.47
BRD3-201ENST00000303407 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
BRD3-201ENST00000303407 MRPS12O15235 138 aaKnown RBP12.14□□□□□ -0.47
BRD3-201ENST00000303407 GAS8-AS1O95177 125 aa12.14□□□□□ -0.47
BRD3-201ENST00000303407 MUC6Q6W4X9 2439 aa12.14□□□□□ -0.47
BRD3-201ENST00000303407 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 HCFC1P51610 2035 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 H7C423 109 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
BRD3-201ENST00000303407 KLLNB2CW77 178 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 EXPH5Q8NEV8 1989 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
BRD3-201ENST00000303407 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
BRD3-201ENST00000303407 TRBV6-5A0A0K0K1A5 114 aa12.12□□□□□ -0.47
BRD3-201ENST00000303407 TSHBP01222 138 aa12.12□□□□□ -0.47
BRD3-201ENST00000303407 PLCE1Q9P212 2302 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 TMEM258P61165 79 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 REG3AQ06141 175 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 DCANP1Q8TF63 244 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 SMIM9A6NGZ8 99 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 LINC00310P59036 64 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 H3BQ85 93 aa12.11□□□□□ -0.47
BRD3-201ENST00000303407 INAFM1C9JVW0 142 aa12.1□□□□□ -0.47
BRD3-201ENST00000303407 DIRC1Q969H9 104 aa12.1□□□□□ -0.47
BRD3-201ENST00000303407 C2orf91Q6ZV80 131 aa12.1□□□□□ -0.47
BRD3-201ENST00000303407 FUSP35637 526 aaKnown RBP eCLIP12.1□□□□□ -0.47
BRD3-201ENST00000303407 B5MCH6 92 aa12.1□□□□□ -0.47
BRD3-201ENST00000303407 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
BRD3-201ENST00000303407 PRR14LQ5THK1 2151 aa12.09□□□□□ -0.47
BRD3-201ENST00000303407 JMJD7-PLA2G4BH0Y9G9 81 aa12.09□□□□□ -0.47
BRD3-201ENST00000303407 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
BRD3-201ENST00000303407 EDN2P20800 178 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 FAM236AA0A1B0GUQ0 79 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 FAM236BA0A1B0GV22 79 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 AVPP01185 164 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 DSCAMO60469 2012 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 LINC00482Q8N8I6 264 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.48
BRD3-201ENST00000303407 HIGD2BQ4VC39 106 aa12.07□□□□□ -0.48
BRD3-201ENST00000303407 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
BRD3-201ENST00000303407 PYGO1Q9Y3Y4 419 aa12.07□□□□□ -0.48
BRD3-201ENST00000303407 CNFNQ9BYD5 112 aa12.07□□□□□ -0.48
BRD3-201ENST00000303407 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 PRM2P04554 102 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 TANC2Q9HCD6 1990 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 TMEM256-PLSCR3K7ERE1 68 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
BRD3-201ENST00000303407 Q8N976 141 aa12.05□□□□□ -0.48
BRD3-201ENST00000303407 CRYGDP07320 174 aa12.05□□□□□ -0.48
BRD3-201ENST00000303407 C14orf132Q9NPU4 83 aa12.05□□□□□ -0.48
BRD3-201ENST00000303407 COL4A2P08572 1712 aa12.04□□□□□ -0.48
BRD3-201ENST00000303407 A8MZ25 164 aa12.04□□□□□ -0.48
BRD3-201ENST00000303407 RAI1Q7Z5J4 1906 aaPredicted RBP12.04□□□□□ -0.48
BRD3-201ENST00000303407 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
BRD3-201ENST00000303407 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
BRD3-201ENST00000303407 POLR2KP53803 58 aaKnown RBP12.04□□□□□ -0.48
BRD3-201ENST00000303407 ANKHD1Q8IWZ3 2542 aaKnown RBP12.04□□□□□ -0.48
BRD3-201ENST00000303407 WFDC10AQ9H1F0 79 aa12.04□□□□□ -0.48
BRD3-201ENST00000303407 ADAMTS20P59510 1910 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 A0A1B0GX51 115 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 UBE2D4Q9Y2X8 147 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 ATOX1O00244 68 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 TRIAP1O43715 76 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 PIK3CD-AS1Q5SR53 167 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 LY6G6DO95868 133 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 COX7BP24311 80 aa12.03□□□□□ -0.48
BRD3-201ENST00000303407 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.48
BRD3-201ENST00000303407 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.48
BRD3-201ENST00000303407 TTC28Q96AY4 2481 aa12.02□□□□□ -0.49
BRD3-201ENST00000303407 TNCP24821 2201 aa12.02□□□□□ -0.49
BRD3-201ENST00000303407 NREPQ16612 68 aa12.02□□□□□ -0.49
BRD3-201ENST00000303407 A0A1W2PPR1 153 aa12.02□□□□□ -0.49
BRD3-201ENST00000303407 CRIP2P52943 208 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms