RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TMEM141Q96I45 108 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 HHLA3Q9XRX5 114 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
SSR3-201ENST00000265044 CEMP1Q6PRD7 247 aaPredicted RBP6.74□□□□□ -1.33
SSR3-201ENST00000265044 ZNF575Q86XF7 245 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 SLC25A29Q8N8R3 303 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 NXPH4O95158 308 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 SPART-AS1P0CW21 52 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 GYPEP15421 78 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 GAGE6Q13070 117 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 DNAJC30Q96LL9 226 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 KIF25-AS1Q9Y6Z4 181 aa6.74□□□□□ -1.33
SSR3-201ENST00000265044 A0A096LNJ9 63 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 SPATA12Q7Z6I5 190 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 SPATA3Q8NHX4 192 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 HIST1H4GQ99525 98 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 CHAC1Q9BUX1 264 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 KIR2DL5BA0A0G2JN68 375 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 KIR2DL5BA0A0G2JPC4 375 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 RS1O15537 224 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 ODF1Q14990 250 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 KIR2DL5AQ8N109 375 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 C20orf203Q8NBC4 194 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 CLUHP3Q96NS8 147 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 BAALCQ8WXS3 180 aa6.73□□□□□ -1.33
SSR3-201ENST00000265044 PRSS2P07478 247 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 LINC00315P59091 139 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 COL5A1-AS1Q5SY13 56 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 ZFHX3Q15911 3703 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 SMIM9A6NGZ8 99 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 ATP5G1P05496 136 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
SSR3-201ENST00000265044 VAMP3Q15836 100 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 MPV17L2Q567V2 206 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 Q6ZSN1 163 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 TTTY13Q9BZ97 58 aa6.72□□□□□ -1.33
SSR3-201ENST00000265044 NBEAL1Q6ZS30 2694 aa6.71□□□□□ -1.33
SSR3-201ENST00000265044 TRBV10-1A0A0K0K1A3 114 aa6.71□□□□□ -1.33
SSR3-201ENST00000265044 PCP2Q8IVA1 136 aa6.71□□□□□ -1.33
SSR3-201ENST00000265044 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.33
SSR3-201ENST00000265044 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
SSR3-201ENST00000265044 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.34
SSR3-201ENST00000265044 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.34
SSR3-201ENST00000265044 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.34
SSR3-201ENST00000265044 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.34
SSR3-201ENST00000265044 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.34
SSR3-201ENST00000265044 RAB37Q96AX2 223 aa6.71□□□□□ -1.34
SSR3-201ENST00000265044 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 H3BRM9 83 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 Q8N976 141 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 ATP6V0E2Q8NHE4 81 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 C19orf73Q9NVV2 129 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 Q9UF83 564 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 COX8AP10176 69 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 PIK3CD-AS1Q5SR53 167 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 TIMM17AQ99595 171 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 A8MTW9 85 aa6.7□□□□□ -1.34
SSR3-201ENST00000265044 A0A1B0GV90 55 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 A6NDN8 102 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 EREGO14944 169 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 TSHBP01222 138 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 WFDC9Q8NEX5 89 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 CST9LQ9H4G1 147 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 G3V4G9 280 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 FGF6P10767 208 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 LINC00467Q9BRT7 94 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 SNHG12Q9BXW3 62 aa6.69□□□□□ -1.34
SSR3-201ENST00000265044 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 MIFP14174 115 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 TRAV26-1A0A087WT03 109 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 C11orf86A6NJI1 115 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 LYRM9A8MSI8 78 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 CLPSL2Q6UWE3 100 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 RETNQ9HD89 108 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 SPANXA1Q9NS26 97 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 CYSRT1A8MQ03 144 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 CIDEAO60543 219 aa6.68□□□□□ -1.34
SSR3-201ENST00000265044 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 PRSS47A8MTI9 375 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 RPL32P62910 135 aaKnown RBP6.67□□□□□ -1.34
SSR3-201ENST00000265044 LBHQ53QV2 105 aaPredicted RBP6.67□□□□□ -1.34
SSR3-201ENST00000265044 MEIG1Q5JSS6 88 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 TIMM21Q9BVV7 248 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 GIG44P09565 113 aaPredicted RBP6.67□□□□□ -1.34
SSR3-201ENST00000265044 PRIMA1Q86XR5 153 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
SSR3-201ENST00000265044 Q6ZUT4 128 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms