RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LEPROTO15243 131 aa15.21■□□□□ 0.03
SNX3-201ENST00000230085 ZNF688P0C7X2 276 aa15.21■□□□□ 0.03
SNX3-201ENST00000230085 TSPEAR-AS2P59090 65 aa15.21■□□□□ 0.03
SNX3-201ENST00000230085 C9orf85Q96MD7 179 aa15.21■□□□□ 0.03
SNX3-201ENST00000230085 ZNRF2Q8NHG8 242 aa15.21■□□□□ 0.02
SNX3-201ENST00000230085 MDFIQ99750 246 aa15.21■□□□□ 0.02
SNX3-201ENST00000230085 GEMIN7Q9H840 131 aaKnown RBP15.21■□□□□ 0.02
SNX3-201ENST00000230085 LINC00527Q9UJ94 153 aa15.21■□□□□ 0.02
SNX3-201ENST00000230085 XGP55808 180 aa15.2■□□□□ 0.02
SNX3-201ENST00000230085 SVIPQ8NHG7 77 aa15.2■□□□□ 0.02
SNX3-201ENST00000230085 SDHAF1A6NFY7 115 aa15.19■□□□□ 0.02
SNX3-201ENST00000230085 FAM159AQ6UWV7 190 aa15.19■□□□□ 0.02
SNX3-201ENST00000230085 EDA2RQ9HAV5 297 aa15.19■□□□□ 0.02
SNX3-201ENST00000230085 MDFICQ9P1T7 246 aa15.19■□□□□ 0.02
SNX3-201ENST00000230085 TMEM223A0PJW6 202 aa15.19■□□□□ 0.02
SNX3-201ENST00000230085 IGHV3-33P01772 117 aa15.18■□□□□ 0.02
SNX3-201ENST00000230085 RNF152Q8N8N0 203 aa15.18■□□□□ 0.02
SNX3-201ENST00000230085 TRBV12-3P01733 135 aa15.17■□□□□ 0.02
SNX3-201ENST00000230085 MT-ATP8P03928 68 aa15.17■□□□□ 0.02
SNX3-201ENST00000230085 LGALS3P17931 250 aaKnown RBP15.17■□□□□ 0.02
SNX3-201ENST00000230085 ID1P41134 155 aa15.17■□□□□ 0.02
SNX3-201ENST00000230085 TMEM263Q8WUH6 116 aaKnown RBP15.17■□□□□ 0.02
SNX3-201ENST00000230085 DAZ1Q9NQZ3 744 aaKnown RBP15.17■□□□□ 0.02
SNX3-201ENST00000230085 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.16■□□□□ 0.02
SNX3-201ENST00000230085 PROK1P58294 105 aa15.16■□□□□ 0.02
SNX3-201ENST00000230085 J3KRW8 73 aa15.16■□□□□ 0.02
SNX3-201ENST00000230085 RHPN1-AS1Q9BWJ2 59 aa15.16■□□□□ 0.02
SNX3-201ENST00000230085 ZNF256Q9Y2P7 627 aaPredicted RBP15.16■□□□□ 0.02
SNX3-201ENST00000230085 TENM1Q9UKZ4 2725 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 M0QY20 66 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 SPRY2O43597 315 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 IGLV1-40P01703 118 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 RPL39P62891 51 aaKnown RBP15.15■□□□□ 0.02
SNX3-201ENST00000230085 TMEM170BQ5T4T1 132 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 C10orf99Q6UWK7 81 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 ANKRD29Q8N6D5 301 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 ERG28Q9UKR5 140 aa15.15■□□□□ 0.02
SNX3-201ENST00000230085 TRPT1Q86TN4 253 aaKnown RBP15.14■□□□□ 0.01
SNX3-201ENST00000230085 DCANP1Q8TF63 244 aa15.14■□□□□ 0.01
SNX3-201ENST00000230085 PTH2Q96A98 100 aa15.14■□□□□ 0.01
SNX3-201ENST00000230085 CITED1Q99966 193 aa15.14■□□□□ 0.01
SNX3-201ENST00000230085 IGHV3-16A0A0C4DH30 117 aa15.13■□□□□ 0.01
SNX3-201ENST00000230085 F6UB75 175 aa15.13■□□□□ 0.01
SNX3-201ENST00000230085 SLC25A20O43772 301 aa15.13■□□□□ 0.01
SNX3-201ENST00000230085 RNF183Q96D59 192 aa15.13■□□□□ 0.01
SNX3-201ENST00000230085 TRAV26-1A0A087WT03 109 aa15.12■□□□□ 0.01
SNX3-201ENST00000230085 M0R2P5 195 aa15.12■□□□□ 0.01
SNX3-201ENST00000230085 RPL13AP40429 203 aaKnown RBP15.12■□□□□ 0.01
SNX3-201ENST00000230085 KRTAP10-3P60369 221 aa15.12■□□□□ 0.01
SNX3-201ENST00000230085 KRTAP21-3Q3LHN1 58 aa15.12■□□□□ 0.01
SNX3-201ENST00000230085 C20orf203Q8NBC4 194 aa15.12■□□□□ 0.01
SNX3-201ENST00000230085 PYGO1Q9Y3Y4 419 aa15.12■□□□□ 0.01
SNX3-201ENST00000230085 TRBV30A0A0K0K1B3 111 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 A4D1N5 150 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 SCGB1C2P0DMR2 95 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 HIST2H2BDQ6DRA6 164 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 RHODO00212 210 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 EIF4EBP3O60516 100 aaPredicted RBP15.11■□□□□ 0.01
SNX3-201ENST00000230085 ZNF22P17026 224 aaPredicted RBP15.11■□□□□ 0.01
SNX3-201ENST00000230085 DEFB1P60022 68 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 CFHR3Q02985 330 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 WFDC12Q8WWY7 111 aa15.11■□□□□ 0.01
SNX3-201ENST00000230085 STAB1Q9NY15 2570 aa15.1■□□□□ 0.01
SNX3-201ENST00000230085 Q6Q795 121 aa15.1■□□□□ 0.01
SNX3-201ENST00000230085 C11orf44Q8N8P7 122 aa15.1■□□□□ 0.01
SNX3-201ENST00000230085 EMP1P54849 157 aa15.08■□□□□ 0.01
SNX3-201ENST00000230085 ATXN8Q156A1 80 aa15.08■□□□□ 0.01
SNX3-201ENST00000230085 JPT2Q9H910 190 aa15.08■□□□□ 0.01
SNX3-201ENST00000230085 ZFAND6Q6FIF0 208 aa15.08■□□□□ 0
SNX3-201ENST00000230085 A0A087WWL8 130 aa15.07■□□□□ 0
SNX3-201ENST00000230085 F5H697 171 aa15.07■□□□□ 0
SNX3-201ENST00000230085 I3L3M4 83 aa15.07■□□□□ 0
SNX3-201ENST00000230085 C3orf56Q8N813 242 aa15.07■□□□□ 0
SNX3-201ENST00000230085 CLUHP3Q96NS8 147 aa15.07■□□□□ 0
SNX3-201ENST00000230085 CD28P10747 220 aa15.06■□□□□ 0
SNX3-201ENST00000230085 RPL11P62913 178 aaKnown RBP15.06■□□□□ 0
SNX3-201ENST00000230085 IGLV4-3A0A075B6K6 122 aa15.06■□□□□ 0
SNX3-201ENST00000230085 MRPS36P82909 103 aaKnown RBP15.06■□□□□ 0
SNX3-201ENST00000230085 SFTA2Q6UW10 78 aa15.06■□□□□ 0
SNX3-201ENST00000230085 SPANXDQ9BXN6 97 aa15.06■□□□□ 0
SNX3-201ENST00000230085 SPANXCQ9NY87 97 aa15.06■□□□□ 0
SNX3-201ENST00000230085 C9JAW5 83 aa15.05■□□□□ -0
SNX3-201ENST00000230085 LINC01620Q4KN68 170 aa15.05■□□□□ -0
SNX3-201ENST00000230085 A0A0J9YXY3 114 aa15.04■□□□□ -0
SNX3-201ENST00000230085 MUSTN1Q8IVN3 82 aa15.04■□□□□ -0
SNX3-201ENST00000230085 LITAFQ99732 161 aa15.04■□□□□ -0
SNX3-201ENST00000230085 TRAV12-3A0A0B4J271 114 aa15.03■□□□□ -0
SNX3-201ENST00000230085 TRBV10-2A0A0K0K1G8 114 aa15.03■□□□□ -0
SNX3-201ENST00000230085 PSMB8P28062 276 aa15.03■□□□□ -0
SNX3-201ENST00000230085 MRPL23Q16540 153 aaKnown RBP15.03■□□□□ -0
SNX3-201ENST00000230085 PIK3CD-AS1Q5SR53 167 aa15.03■□□□□ -0
SNX3-201ENST00000230085 CITED2Q99967 270 aaPredicted RBP15.03■□□□□ -0
SNX3-201ENST00000230085 IGHV1OR15-1A0A075B7D0 117 aa15.03■□□□□ -0
SNX3-201ENST00000230085 PF4V1P10720 104 aa15.03■□□□□ -0
SNX3-201ENST00000230085 SPANXA1Q9NS26 97 aa15.03■□□□□ -0
SNX3-201ENST00000230085 TRRAPQ9Y4A5 3859 aa15.01□□□□□ -0.01
SNX3-201ENST00000230085 IGHV3-11P01762 117 aa15.01□□□□□ -0.01
SNX3-201ENST00000230085 ELANEP08246 267 aa15.01□□□□□ -0.01
SNX3-201ENST00000230085 ZNF56Q15929 161 aa15.01□□□□□ -0.01
SNX3-201ENST00000230085 TRGV11A0A075B6L2 103 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms