RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 UTP20O75691 2785 aaKnown RBP13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 NDUFA4O00483 81 aa13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 CELSR2Q9HCU4 2923 aa13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 C5orf56Q8N8D9 126 aa13.06□□□□□ -0.32
CDKN1B-201ENST00000228872 TRGV11A0A075B6L2 103 aa13.06□□□□□ -0.32
CDKN1B-201ENST00000228872 TRAV41A0A0B4J266 112 aa13.06□□□□□ -0.32
CDKN1B-201ENST00000228872 SAA4P35542 130 aa13.06□□□□□ -0.32
CDKN1B-201ENST00000228872 TRAV8-3A0A0A6YYJ7 113 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 MIAQ16674 131 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 C19orf54Q5BKX5 351 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 TMEM101Q96IK0 257 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 VPREB3Q9UKI3 123 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 TRAV12-3A0A0B4J271 114 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 I3L3M4 83 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 DSCR9P59020 149 aa13.05□□□□□ -0.32
CDKN1B-201ENST00000228872 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
CDKN1B-201ENST00000228872 NPC2P61916 151 aa13.04□□□□□ -0.32
CDKN1B-201ENST00000228872 NDUFA12Q9UI09 145 aa13.04□□□□□ -0.32
CDKN1B-201ENST00000228872 SPG11Q96JI7 2443 aa13.03□□□□□ -0.32
CDKN1B-201ENST00000228872 IGHV4-61A0A0C4DH41 118 aa13.03□□□□□ -0.32
CDKN1B-201ENST00000228872 NRGNQ92686 78 aa13.03□□□□□ -0.32
CDKN1B-201ENST00000228872 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
CDKN1B-201ENST00000228872 PLA2G2AP14555 144 aa13.03□□□□□ -0.32
CDKN1B-201ENST00000228872 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
CDKN1B-201ENST00000228872 IGHV4-30-2A0A087WSY4 118 aa13.02□□□□□ -0.32
CDKN1B-201ENST00000228872 IGHV1-58A0A0C4DH39 117 aa13.02□□□□□ -0.32
CDKN1B-201ENST00000228872 FAM236AA0A1B0GUQ0 79 aa13.02□□□□□ -0.32
CDKN1B-201ENST00000228872 FAM236BA0A1B0GV22 79 aa13.02□□□□□ -0.32
CDKN1B-201ENST00000228872 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
CDKN1B-201ENST00000228872 TMEM219Q86XT9 240 aa13.02□□□□□ -0.33
CDKN1B-201ENST00000228872 PPDPFQ9H3Y8 114 aa13.02□□□□□ -0.33
CDKN1B-201ENST00000228872 CD28P10747 220 aa13.01□□□□□ -0.33
CDKN1B-201ENST00000228872 FAM104AQ969W3 186 aa13.01□□□□□ -0.33
CDKN1B-201ENST00000228872 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
CDKN1B-201ENST00000228872 IMUPQ9GZP8 106 aa13□□□□□ -0.33
CDKN1B-201ENST00000228872 J3QKU1 62 aa13□□□□□ -0.33
CDKN1B-201ENST00000228872 NPFFO15130 113 aa12.99□□□□□ -0.33
CDKN1B-201ENST00000228872 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
CDKN1B-201ENST00000228872 A8MZ25 164 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 YAE1D1Q9NRH1 226 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 ACYP1P07311 99 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 VSIG2Q96IQ7 327 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 CSMD2Q7Z408 3487 aa12.98□□□□□ -0.33
CDKN1B-201ENST00000228872 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
CDKN1B-201ENST00000228872 FAM208BQ5VWN6 2430 aa12.97□□□□□ -0.33
CDKN1B-201ENST00000228872 LRRK2Q5S007 2527 aa12.97□□□□□ -0.33
CDKN1B-201ENST00000228872 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.33
CDKN1B-201ENST00000228872 PRRC2AP48634 2157 aaKnown RBP12.96□□□□□ -0.33
CDKN1B-201ENST00000228872 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
CDKN1B-201ENST00000228872 SMCR5Q8TEV8 140 aa12.96□□□□□ -0.33
CDKN1B-201ENST00000228872 KRTAP10-9P60411 292 aa12.96□□□□□ -0.34
CDKN1B-201ENST00000228872 C3orf22Q8N5N4 141 aa12.96□□□□□ -0.34
CDKN1B-201ENST00000228872 DCANP1Q8TF63 244 aa12.96□□□□□ -0.34
CDKN1B-201ENST00000228872 C9orf153Q5TBE3 101 aa12.95□□□□□ -0.34
CDKN1B-201ENST00000228872 LRRC75A-AS1Q8N1F1 130 aa12.95□□□□□ -0.34
CDKN1B-201ENST00000228872 FBN2P35556 2912 aa12.95□□□□□ -0.34
CDKN1B-201ENST00000228872 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
CDKN1B-201ENST00000228872 ID1P41134 155 aa12.95□□□□□ -0.34
CDKN1B-201ENST00000228872 DUX5Q96PT3 197 aa12.95□□□□□ -0.34
CDKN1B-201ENST00000228872 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 TIMM17BO60830 172 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 MSMBP08118 114 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 LINC00694P0DN24 101 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 EDN2P20800 178 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 A0A096LNT2 108 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 TINCRA0A1B0GVN0 87 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 DAND5Q8N907 189 aa12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
CDKN1B-201ENST00000228872 NDUFA7O95182 113 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 LINC00643Q86TS7 51 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 B4DSR2 109 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 DEFB113Q30KQ7 82 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 DAZ1Q9NQZ3 744 aaKnown RBP12.93□□□□□ -0.34
CDKN1B-201ENST00000228872 IGHV1OR15-1A0A075B7D0 117 aa12.92□□□□□ -0.34
CDKN1B-201ENST00000228872 CENPEQ02224 2701 aa12.92□□□□□ -0.34
CDKN1B-201ENST00000228872 IGKV3-20P01619 116 aa12.92□□□□□ -0.34
CDKN1B-201ENST00000228872 UQCRQO14949 82 aa12.91□□□□□ -0.34
CDKN1B-201ENST00000228872 COX7A2LO14548 114 aa12.9□□□□□ -0.34
CDKN1B-201ENST00000228872 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
CDKN1B-201ENST00000228872 USP9YO00507 2555 aaPredicted RBP12.89□□□□□ -0.35
CDKN1B-201ENST00000228872 ANKRD17O75179 2603 aaKnown RBP12.89□□□□□ -0.35
CDKN1B-201ENST00000228872 PF4V1P10720 104 aa12.89□□□□□ -0.35
CDKN1B-201ENST00000228872 H3BUA1 57 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 HERVK_113P63121 156 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 SDIM1Q6ZPB5 146 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 LINC01356Q8N9X3 169 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 TENM4Q6N022 2769 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 IGHG2P01859 326 aa12.88□□□□□ -0.35
CDKN1B-201ENST00000228872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.354e-7■■■■□ 23.4
CDKN1B-201ENST00000228872 ATP5G1P05496 136 aa12.87□□□□□ -0.35
CDKN1B-201ENST00000228872 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
CDKN1B-201ENST00000228872 NDUFA1O15239 70 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms