RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 CRIP3Q6Q6R5 217 aa13.39□□□□□ -0.27
EXTL3-201ENST00000220562 HIGD2AQ9BW72 106 aa13.39□□□□□ -0.27
EXTL3-201ENST00000220562 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
EXTL3-201ENST00000220562 H7C423 109 aa13.38□□□□□ -0.27
EXTL3-201ENST00000220562 ABCA4P78363 2273 aa13.38□□□□□ -0.27
EXTL3-201ENST00000220562 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
EXTL3-201ENST00000220562 CFAP126Q5VTH2 177 aa13.37□□□□□ -0.27
EXTL3-201ENST00000220562 ZGRF1Q86YA3 2104 aa13.37□□□□□ -0.27
EXTL3-201ENST00000220562 CDKN2A-AS1Q9UH64 79 aa13.37□□□□□ -0.27
EXTL3-201ENST00000220562 BPY2O14599 106 aa13.37□□□□□ -0.27
EXTL3-201ENST00000220562 SLPIP03973 132 aa13.37□□□□□ -0.27
EXTL3-201ENST00000220562 IGLV4-3A0A075B6K6 122 aa13.36□□□□□ -0.27
EXTL3-201ENST00000220562 LINC00643Q86TS7 51 aa13.36□□□□□ -0.27
EXTL3-201ENST00000220562 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
EXTL3-201ENST00000220562 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
EXTL3-201ENST00000220562 SMIM9A6NGZ8 99 aa13.36□□□□□ -0.27
EXTL3-201ENST00000220562 TEX49A0A1B0GTD5 131 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 NUP210LQ5VU65 1888 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 LY6LH3BQJ8 138 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 CRIP1P50238 77 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 ZFAND3Q9H8U3 227 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 ZNF22P17026 224 aaPredicted RBP13.35□□□□□ -0.27
EXTL3-201ENST00000220562 PROK1P58294 105 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 DEFB131BA0A096LNP1 70 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 IL17DQ8TAD2 202 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 DOPEY2Q9Y3R5 2298 aa13.35□□□□□ -0.27
EXTL3-201ENST00000220562 SEC61GP60059 68 aa13.34□□□□□ -0.27
EXTL3-201ENST00000220562 INAFM1C9JVW0 142 aa13.34□□□□□ -0.27
EXTL3-201ENST00000220562 SDIM1Q6ZPB5 146 aa13.34□□□□□ -0.27
EXTL3-201ENST00000220562 LINC00482Q8N8I6 264 aa13.34□□□□□ -0.27
EXTL3-201ENST00000220562 A0A096LNI7 61 aa13.34□□□□□ -0.27
EXTL3-201ENST00000220562 C10orf99Q6UWK7 81 aa13.34□□□□□ -0.27
EXTL3-201ENST00000220562 HILS1P60008 231 aa13.33□□□□□ -0.27
EXTL3-201ENST00000220562 PIK3CD-AS1Q5SR53 167 aa13.33□□□□□ -0.28
EXTL3-201ENST00000220562 RNF185Q96GF1 192 aa13.33□□□□□ -0.28
EXTL3-201ENST00000220562 SCXQ7RTU7 201 aa13.32□□□□□ -0.28
EXTL3-201ENST00000220562 M0QY20 66 aa13.32□□□□□ -0.28
EXTL3-201ENST00000220562 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
EXTL3-201ENST00000220562 ARHGAP21Q5T5U3 1957 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 MAPKAPK5-AS1Q8N8E1 139 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 GPR179Q6PRD1 2367 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 FAM19A5Q7Z5A7 132 aaPredicted RBP13.31□□□□□ -0.28
EXTL3-201ENST00000220562 LINC00308Q8TCZ7 52 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 NACAE9PAV3 2078 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 A0A087WZ39 114 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 U3KQK5 164 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 TRBV6-8A0A0A6YYG3 113 aa13.31□□□□□ -0.28
EXTL3-201ENST00000220562 Q6ZSV7 163 aa13.3□□□□□ -0.28
EXTL3-201ENST00000220562 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
EXTL3-201ENST00000220562 MT-ATP8P03928 68 aa13.29□□□□□ -0.28
EXTL3-201ENST00000220562 EBI3Q14213 229 aa13.29□□□□□ -0.28
EXTL3-201ENST00000220562 C11orf71Q6IPW1 123 aa13.29□□□□□ -0.28
EXTL3-201ENST00000220562 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
EXTL3-201ENST00000220562 FSTL3O95633 263 aa13.28□□□□□ -0.28
EXTL3-201ENST00000220562 IBA57-AS1B1ANH7 110 aa13.28□□□□□ -0.28
EXTL3-201ENST00000220562 TRIAP1O43715 76 aa13.28□□□□□ -0.28
EXTL3-201ENST00000220562 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
EXTL3-201ENST00000220562 ABCA1O95477 2261 aa13.27□□□□□ -0.28
EXTL3-201ENST00000220562 XAGE1AQ9HD64 81 aa13.27□□□□□ -0.29
EXTL3-201ENST00000220562 BRK1Q8WUW1 75 aa13.27□□□□□ -0.29
EXTL3-201ENST00000220562 COL4A4P53420 1690 aaPredicted RBP13.26□□□□□ -0.29
EXTL3-201ENST00000220562 NDUFV3P56181 108 aaKnown RBP13.26□□□□□ -0.29
EXTL3-201ENST00000220562 TRBV6-4A0A1B0GX49 114 aa13.26□□□□□ -0.29
EXTL3-201ENST00000220562 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.25□□□□□ -0.29
EXTL3-201ENST00000220562 MIFP14174 115 aa13.25□□□□□ -0.29
EXTL3-201ENST00000220562 ALPK3Q96L96 1907 aa13.25□□□□□ -0.29
EXTL3-201ENST00000220562 BBC3Q96PG8 261 aaPredicted RBP13.25□□□□□ -0.29
EXTL3-201ENST00000220562 A8MZ25 164 aa13.25□□□□□ -0.29
EXTL3-201ENST00000220562 IGLV2-11P01706 119 aa13.25□□□□□ -0.29
EXTL3-201ENST00000220562 ZNF702PQ9H963 129 aa13.24□□□□□ -0.29
EXTL3-201ENST00000220562 CASC2Q6XLA1 102 aa13.24□□□□□ -0.29
EXTL3-201ENST00000220562 Q8N976 141 aa13.24□□□□□ -0.29
EXTL3-201ENST00000220562 WFDC10BQ8IUB3 73 aa13.23□□□□□ -0.29
EXTL3-201ENST00000220562 MPLKIPQ8TAP9 179 aa13.23□□□□□ -0.29
EXTL3-201ENST00000220562 C18orf65Q6ZTR6 163 aa13.23□□□□□ -0.29
EXTL3-201ENST00000220562 C20orf197Q8N268 126 aa13.22□□□□□ -0.29
EXTL3-201ENST00000220562 SVIPQ8NHG7 77 aa13.22□□□□□ -0.29
EXTL3-201ENST00000220562 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
EXTL3-201ENST00000220562 TSHBP01222 138 aa13.22□□□□□ -0.29
EXTL3-201ENST00000220562 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
EXTL3-201ENST00000220562 PCNX1Q96RV3 2341 aa13.21□□□□□ -0.29
EXTL3-201ENST00000220562 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 PRR9Q5T870 116 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 PSMG3-AS1Q96PY0 264 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 USP17L23D6RBM5 183 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 C6orf99Q4VX62 202 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 LY6G6DO95868 133 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 SYCNQ0VAF6 134 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 ZNF843Q8N446 348 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 IGKV2-28A0A075B6P5 120 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 IGKV2D-28P01615 120 aa13.2□□□□□ -0.3
EXTL3-201ENST00000220562 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
EXTL3-201ENST00000220562 RIF1Q5UIP0 2472 aaKnown RBP13.19□□□□□ -0.3
EXTL3-201ENST00000220562 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
EXTL3-201ENST00000220562 NRACQ8N912 160 aa13.19□□□□□ -0.3
EXTL3-201ENST00000220562 TRBV27A0A0K0K1C4 114 aa13.19□□□□□ -0.3
EXTL3-201ENST00000220562 WFDC10AQ9H1F0 79 aa13.19□□□□□ -0.3
EXTL3-201ENST00000220562 SHANK1Q9Y566 2161 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms