RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.37
KDM4B-201ENST00000159111 TMEM223A0PJW6 202 aa12.77□□□□□ -0.37
KDM4B-201ENST00000159111 CFAP126Q5VTH2 177 aa12.76□□□□□ -0.37
KDM4B-201ENST00000159111 PTPRSQ13332 1948 aa12.76□□□□□ -0.37
KDM4B-201ENST00000159111 ATOX1O00244 68 aa12.76□□□□□ -0.37
KDM4B-201ENST00000159111 RNASE8Q8TDE3 154 aaKnown RBP12.76□□□□□ -0.37
KDM4B-201ENST00000159111 ZNF702PQ9H963 129 aa12.76□□□□□ -0.37
KDM4B-201ENST00000159111 M0QY20 66 aa12.76□□□□□ -0.37
KDM4B-201ENST00000159111 ZNF843Q8N446 348 aa12.76□□□□□ -0.37
KDM4B-201ENST00000159111 UFSP1Q6NVU6 142 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 SPANXB1Q9NS25 103 aaPredicted RBP12.75□□□□□ -0.37
KDM4B-201ENST00000159111 NREPQ16612 68 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 C11orf45Q8TAV5 145 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 IGLV4-3A0A075B6K6 122 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 NDUFS5O43920 106 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 PDE6GP18545 87 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 REG3AQ06141 175 aa12.75□□□□□ -0.37
KDM4B-201ENST00000159111 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
KDM4B-201ENST00000159111 UBE2AP49459 152 aa12.74□□□□□ -0.37
KDM4B-201ENST00000159111 IL17DQ8TAD2 202 aa12.74□□□□□ -0.37
KDM4B-201ENST00000159111 SPTAN1Q13813 2472 aaKnown RBP12.74□□□□□ -0.37
KDM4B-201ENST00000159111 TRAV26-1A0A087WT03 109 aa12.74□□□□□ -0.37
KDM4B-201ENST00000159111 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
KDM4B-201ENST00000159111 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
KDM4B-201ENST00000159111 TRBV6-5A0A0K0K1A5 114 aa12.73□□□□□ -0.37
KDM4B-201ENST00000159111 G3V4G9 280 aa12.73□□□□□ -0.37
KDM4B-201ENST00000159111 COX7BP24311 80 aa12.73□□□□□ -0.37
KDM4B-201ENST00000159111 TRBV6-4A0A1B0GX49 114 aa12.73□□□□□ -0.37
KDM4B-201ENST00000159111 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
KDM4B-201ENST00000159111 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
KDM4B-201ENST00000159111 HIST2H2BDQ6DRA6 164 aa12.72□□□□□ -0.37
KDM4B-201ENST00000159111 MED12LQ86YW9 2145 aa12.72□□□□□ -0.37
KDM4B-201ENST00000159111 NDUFB1O75438 58 aa12.72□□□□□ -0.37
KDM4B-201ENST00000159111 LINC00269Q8N2A0 174 aa12.72□□□□□ -0.37
KDM4B-201ENST00000159111 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
KDM4B-201ENST00000159111 TCL1BO95988 128 aa12.72□□□□□ -0.37
KDM4B-201ENST00000159111 PRB2P02812 416 aaPredicted RBP12.71□□□□□ -0.37
KDM4B-201ENST00000159111 PYGO1Q9Y3Y4 419 aa12.71□□□□□ -0.37
KDM4B-201ENST00000159111 IGKV3D-7A0A0C4DH55 119 aa12.71□□□□□ -0.37
KDM4B-201ENST00000159111 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
KDM4B-201ENST00000159111 MIFP14174 115 aa12.7□□□□□ -0.38
KDM4B-201ENST00000159111 NOTCH3Q9UM47 2321 aa12.7□□□□□ -0.38
KDM4B-201ENST00000159111 TRBV27A0A0K0K1C4 114 aa12.7□□□□□ -0.38
KDM4B-201ENST00000159111 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■■□ 23.8
KDM4B-201ENST00000159111 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
KDM4B-201ENST00000159111 BRK1Q8WUW1 75 aa12.69□□□□□ -0.38
KDM4B-201ENST00000159111 CDKN2A-AS1Q9UH64 79 aa12.69□□□□□ -0.38
KDM4B-201ENST00000159111 IGHV4-28A0A0C4DH34 117 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 C10orf99Q6UWK7 81 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 TRBV6-8A0A0A6YYG3 113 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 FAM236AA0A1B0GUQ0 79 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 FAM236BA0A1B0GV22 79 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 A0A1B0GX51 115 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 KLLNB2CW77 178 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 IBA57-AS1B1ANH7 110 aa12.68□□□□□ -0.38
KDM4B-201ENST00000159111 HIGD2BQ4VC39 106 aa12.67□□□□□ -0.38
KDM4B-201ENST00000159111 NRACQ8N912 160 aa12.67□□□□□ -0.38
KDM4B-201ENST00000159111 INAFM1C9JVW0 142 aa12.67□□□□□ -0.38
KDM4B-201ENST00000159111 ATG2AQ2TAZ0 1938 aa12.66□□□□□ -0.38
KDM4B-201ENST00000159111 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
KDM4B-201ENST00000159111 HILS1P60008 231 aa12.66□□□□□ -0.38
KDM4B-201ENST00000159111 MP68P56378 58 aa12.66□□□□□ -0.38
KDM4B-201ENST00000159111 WFDC9Q8NEX5 89 aa12.66□□□□□ -0.38
KDM4B-201ENST00000159111 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.38
KDM4B-201ENST00000159111 COL5A1P20908 1838 aaPredicted RBP12.65□□□□□ -0.38
KDM4B-201ENST00000159111 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
KDM4B-201ENST00000159111 C9orf85Q96MD7 179 aa12.65□□□□□ -0.38
KDM4B-201ENST00000159111 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
KDM4B-201ENST00000159111 B9D2Q9BPU9 175 aa12.64□□□□□ -0.39
KDM4B-201ENST00000159111 TSHBP01222 138 aa12.64□□□□□ -0.39
KDM4B-201ENST00000159111 PRR9Q5T870 116 aa12.64□□□□□ -0.39
KDM4B-201ENST00000159111 LINC00643Q86TS7 51 aa12.64□□□□□ -0.39
KDM4B-201ENST00000159111 LINC00308Q8TCZ7 52 aa12.64□□□□□ -0.39
KDM4B-201ENST00000159111 TIMM17BO60830 172 aa12.63□□□□□ -0.39
KDM4B-201ENST00000159111 DEFB131BA0A096LNP1 70 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 CRYGDP07320 174 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 PIK3CD-AS1Q5SR53 167 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 PTH2Q96A98 100 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
KDM4B-201ENST00000159111 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 IGKV2D-26A0A0A0MRZ7 120 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 TRBV30A0A0K0K1B3 111 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 C14orf132Q9NPU4 83 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 LY6G6DO95868 133 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 PROK1P58294 105 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 LINC01006Q8NI28 216 aa12.61□□□□□ -0.39
KDM4B-201ENST00000159111 MRPL55Q7Z7F7 128 aaKnown RBP12.6□□□□□ -0.39
KDM4B-201ENST00000159111 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
KDM4B-201ENST00000159111 MRPS36P82909 103 aaKnown RBP12.6□□□□□ -0.39
KDM4B-201ENST00000159111 KIAA1549Q9HCM3 1950 aa12.6□□□□□ -0.39
KDM4B-201ENST00000159111 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
KDM4B-201ENST00000159111 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
KDM4B-201ENST00000159111 MRPS12O15235 138 aaKnown RBP12.58□□□□□ -0.4
KDM4B-201ENST00000159111 POLR2KP53803 58 aaKnown RBP12.58□□□□□ -0.4
KDM4B-201ENST00000159111 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
KDM4B-201ENST00000159111 CDSNQ15517 529 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms