RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Klf2Q60843 354 aaKnown RBP12.14□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm45717A0A1B0GT68 152 aa12.14□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Igsf23B2RTN2 239 aa12.14□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Rasl11aQ6IMB1 242 aa12.14□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 GaptQ8CB93 157 aa12.14□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 MymxQ2Q5T5 84 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Olfr1419Q7TQS2 343 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Elovl5Q8BHI7 299 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 BC049762Q8C601 163 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 3100002H09RikQ9CXW6 140 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Trdv2-1A0A0G2JGB9 116 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Cited2O35740 269 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Wbp1P97764 304 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Tmem29A2ANF5 204 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm9945Q8BNZ3 91 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Olfr523Q8VFE7 317 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Hcfc2Q9D968 241 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Klk1b27Q9JM71 263 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Lhx2Q9Z0S2 406 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Cacna1aP97445 2368 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Fgf5P15656 264 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Pmaip1Q9JM54 103 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Opn3Q9WUK7 400 aa12.13□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Pax8Q00288 457 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Znf329Q6GQR8 522 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 GalmQ8K157 342 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 IcosQ9WVS0 200 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Trav6d-3A0A075B6B3 112 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Trav7-5A0A0G2JFX6 112 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm19345G3UYD9 124 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Zfp72Q0VFY0 435 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Trav6-3Q5R1E6 112 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 CompQ9R0G6 755 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm36368A0A1D5RLK8 91 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Zfp983E9PUT0 460 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Zfp36l2P23949 484 aaKnown RBP12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Sox15P43267 231 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Spint3Q3UW09 88 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 H2al1nQ497L1 109 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Zic3Q62521 466 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Hapln4Q80WM4 400 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Znrf1Q91V17 227 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Prss41Q920S2 322 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Rnf151Q9CQ29 239 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 H2al3Q9D4U4 128 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 eef1akmt3D3YWP0 232 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Mmp23O88676 391 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 MavsQ8VCF0 503 aa12.12□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Tm4sf19E9Q9H8 206 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Prss28Q924N9 274 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 AmtnQ9D3J8 213 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Sh2d6Q9D413 297 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 PpoxP51175 477 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Tmem100Q9CQG9 134 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Zfpl1Q9DB43 310 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Zfp950A0A0U1RQ46 609 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm20878L7N244 103 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 PspnO70300 156 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 VwceQ3U515 929 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Defa20Q45VN2 95 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Poc1aQ8JZX3 405 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Olfr364-ps1A0A140T8Q2 307 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm14548E9Q1Z6 680 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm17727E9Q4V7 109 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Klrd1O54707 179 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Vamp8O70404 101 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Fgf4P11403 202 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Defa-rs12P50716 91 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Saxo2Q8BQB6 394 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Vmn1r216Q8R257 298 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Mcrip2Q9CQB2 160 aaKnown RBP12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Hyls1Q9CXX0 307 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Chd3B1AR17 2055 aa12.11□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm20458E9PXJ7 78 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Spint5J3KMK8 105 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Tac4Q99N14 128 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Spcs1Q9D958 161 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Igkv14-126A0A075B5K0 117 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Ighv7-3A0A075B5R2 120 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Dynlt3P56387 116 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Dctn5Q9QZB9 182 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Foxi3E0CZH3 425 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm10203F6QJ09 66 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm10881P01642 115 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Pate2Q3UW31 111 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Tmem89Q9DA04 169 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Ighv9-3A0A0B4J1J5 117 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Timp3P39876 211 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Znf691Q3TDE8 283 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Tmprss12Q3V0Q7 336 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Gm9944Q8C559 102 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 BC106179Q8C9L1 186 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Q8CF25 301 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Rnase2aQ8K196 155 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 LbhQ9CX60 105 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 ThadaA8C756 1938 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Efnb3O35393 340 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Cacng7P62956 275 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 AdipoqQ60994 247 aa12.1□□□□□ -0.47
Pcdha11-202ENSMUST00000115657 Ss18Q62280 418 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 78.5 ms