RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 VCYO14598 125 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 FCER1GP30273 86 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 APOC4P55056 127 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 FXYD7P58549 80 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 LAGE3Q14657 143 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 TM2D3Q9BRN9 247 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 ST20Q9HBF5 79 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 XCL2Q9UBD3 114 aa12.46□□□□□ -0.41
PHGDH-234ENST00000642041 F5H697 171 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 ATP5LO75964 103 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 MGPP08493 103 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 DAZ2Q13117 558 aaKnown RBP12.45□□□□□ -0.42
PHGDH-234ENST00000642041 Q6ZWC4 215 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 NRACQ8N912 160 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 DNAJC30Q96LL9 226 aa12.45□□□□□ -0.42
PHGDH-234ENST00000642041 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 TSTD3H0UI37 97 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 RRN3P1Q2M238 152 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 KIR2DL4Q99706 377 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 SMIM2Q9BVW6 85 aa12.44□□□□□ -0.42
PHGDH-234ENST00000642041 CRYGDP07320 174 aa12.43□□□□□ -0.42
PHGDH-234ENST00000642041 KRTDAPP60985 99 aa12.43□□□□□ -0.42
PHGDH-234ENST00000642041 ZNF124Q15973 351 aa12.43□□□□□ -0.42
PHGDH-234ENST00000642041 C1orf158Q8N1D5 194 aa12.43□□□□□ -0.42
PHGDH-234ENST00000642041 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
PHGDH-234ENST00000642041 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
PHGDH-234ENST00000642041 HTN1P15515 57 aa12.42□□□□□ -0.42
PHGDH-234ENST00000642041 LINC00315P59091 139 aa12.42□□□□□ -0.42
PHGDH-234ENST00000642041 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
PHGDH-234ENST00000642041 ZNF705AQ6ZN79 300 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-234ENST00000642041 C11orf72Q8NBR9 251 aa12.42□□□□□ -0.42
PHGDH-234ENST00000642041 NCR2O95944 276 aa12.41□□□□□ -0.42
PHGDH-234ENST00000642041 C3orf79P0CE67 100 aa12.41□□□□□ -0.42
PHGDH-234ENST00000642041 PKIAP61925 76 aa12.41□□□□□ -0.42
PHGDH-234ENST00000642041 ZNF56Q15929 161 aa12.41□□□□□ -0.42
PHGDH-234ENST00000642041 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
PHGDH-234ENST00000642041 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
PHGDH-234ENST00000642041 IGLV2-18A0A075B6J9 118 aa12.4□□□□□ -0.42
PHGDH-234ENST00000642041 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
PHGDH-234ENST00000642041 SYS1-DBNDD2H3BUS1 97 aa12.4□□□□□ -0.42
PHGDH-234ENST00000642041 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 MUC4Q99102 2169 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 TRBV27A0A0K0K1C4 114 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 RS1O15537 224 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
PHGDH-234ENST00000642041 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 TEX43Q6ZNM6 134 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 CSNK1G2-AS1Q8NCQ2 148 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 IL17DQ8TAD2 202 aa12.39□□□□□ -0.43
PHGDH-234ENST00000642041 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
PHGDH-234ENST00000642041 HSBP1L1C9JCN9 74 aa12.38□□□□□ -0.43
PHGDH-234ENST00000642041 M0QY20 66 aa12.38□□□□□ -0.43
PHGDH-234ENST00000642041 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
PHGDH-234ENST00000642041 TRAV4A0A0B4J268 109 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 NUDT3O95989 172 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 RPL35AP18077 110 aaKnown RBP12.37□□□□□ -0.43
PHGDH-234ENST00000642041 AZU1P20160 251 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 RHOHQ15669 191 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 IFI27L1Q96BM0 104 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
PHGDH-234ENST00000642041 A0A087WWL8 130 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 A8MZ25 164 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 IGHV3-53P01767 116 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 NPSP0C0P6 89 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 LGALS9CQ6DKI2 356 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 OR4C5Q8NGB2 326 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
PHGDH-234ENST00000642041 IGHV3OR16-12A0A075B7B8 117 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 TRAV26-2A0A0B4J265 109 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 I3L3M4 83 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 GIG44P09565 113 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-234ENST00000642041 PAPPA-AS1Q5QFB9 102 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 ABCA13Q86UQ4 5058 aa12.35□□□□□ -0.43
PHGDH-234ENST00000642041 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
PHGDH-234ENST00000642041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-234ENST00000642041 UFSP1Q6NVU6 142 aa12.34□□□□□ -0.43
PHGDH-234ENST00000642041 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 SPRY2O43597 315 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 LINC01545Q5VT33 79 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 TOMM6Q96B49 74 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
PHGDH-234ENST00000642041 TRAV9-2A0A087WT02 112 aa12.32□□□□□ -0.44
PHGDH-234ENST00000642041 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
PHGDH-234ENST00000642041 GATA1P15976 413 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-234ENST00000642041 Q6ZN92 141 aa12.32□□□□□ -0.44
PHGDH-234ENST00000642041 ERASQ7Z444 233 aa12.32□□□□□ -0.44
PHGDH-234ENST00000642041 LYRM9A8MSI8 78 aa12.31□□□□□ -0.44
PHGDH-234ENST00000642041 MIFP14174 115 aa12.31□□□□□ -0.44
PHGDH-234ENST00000642041 JPT2Q9H910 190 aa12.31□□□□□ -0.44
PHGDH-234ENST00000642041 A0A096LNJ9 63 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms