RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IGHV3-30P01768 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-33P01772 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-30-3P0DP02 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-30-5P0DP03 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 ADIRFQ15847 76 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 LINC01556Q5JQF7 62 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 NAT8Q9UHE5 227 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 DNAH5Q8TE73 4624 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 TRGC1P0CF51 173 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 RAB14P61106 215 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 TSKUQ8WUA8 353 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 DPH3P1Q9H4G8 78 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 HIGD1CA8MV81 97 aa14.69□□□□□ -0.06
SCN1B-206ENST00000638536 TRAV9-2A0A087WT02 112 aa14.68□□□□□ -0.06
SCN1B-206ENST00000638536 CLLU1Q5K131 121 aa14.68□□□□□ -0.06
SCN1B-206ENST00000638536 BTF3P20290 206 aaKnown RBP14.66□□□□□ -0.06
SCN1B-206ENST00000638536 A0A087WWC5 75 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 TRAV26-2A0A0B4J265 109 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 C15orf54Q8N8G6 183 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 GFRA4Q9GZZ7 299 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 LRP1BQ9NZR2 4599 aa14.65□□□□□ -0.06
SCN1B-206ENST00000638536 K7EP13 123 aa14.65□□□□□ -0.06
SCN1B-206ENST00000638536 NTM-AS1Q6ZSK4 140 aa14.65□□□□□ -0.06
SCN1B-206ENST00000638536 DAZ4Q86SG3 579 aaKnown RBP14.65□□□□□ -0.06
SCN1B-206ENST00000638536 DAZ3Q9NR90 486 aaKnown RBP14.65□□□□□ -0.06
SCN1B-206ENST00000638536 KIAA1109Q2LD37 5005 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 ATP6V1G1O75348 118 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 NIT1Q86X76 327 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 NUP35Q8NFH5 326 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 TRBV6-8A0A0A6YYG3 113 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 IBA57-AS1B1ANH7 110 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 RASL11AQ6T310 242 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 C10orf126Q8N4M7 172 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 GATD1Q8NB37 220 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 DEFB104AQ8WTQ1 72 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 A0A1B0GUT8 65 aa14.62□□□□□ -0.07
SCN1B-206ENST00000638536 H7C1H1 209 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 DNAJC30Q96LL9 226 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 Q9HAA7 133 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 NIT2Q9NQR4 276 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 GAS8-AS1O95177 125 aa14.6□□□□□ -0.07
SCN1B-206ENST00000638536 SMIM27A0A1W2PRY6 76 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 NDUFA5Q16718 116 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 RPL39LQ96EH5 51 aaKnown RBP14.59□□□□□ -0.07
SCN1B-206ENST00000638536 NFE4Q86UQ8 179 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 BORCS7Q96B45 105 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 KRTAP10-2P60368 255 aa14.58□□□□□ -0.08
SCN1B-206ENST00000638536 SMIM15Q7Z3B0 74 aa14.58□□□□□ -0.08
SCN1B-206ENST00000638536 NAT8BQ9UHF3 227 aa14.58□□□□□ -0.08
SCN1B-206ENST00000638536 FUSP35637 526 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCN1B-206ENST00000638536 RNF185Q96GF1 192 aa14.57□□□□□ -0.08
SCN1B-206ENST00000638536 TMEM191AQ9H0A3 160 aa14.56□□□□□ -0.08
SCN1B-206ENST00000638536 TMEM262E9PQX1 116 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 MPV17L2Q567V2 206 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 SPATA12Q7Z6I5 190 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 AMN1Q8IY45 258 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 KLK12Q9UKR0 248 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.55□□□□□ -0.08
SCN1B-206ENST00000638536 CHCHD5Q9BSY4 110 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 URGCP-MRPS24S4R325 110 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 A0A087WX48 190 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 ADCYAP1P18509 176 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 RAB4AP20338 218 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 RIGQ13278 110 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 LAGE3Q14657 143 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 A0A087WTM6 91 aa14.53□□□□□ -0.08
SCN1B-206ENST00000638536 Q8N976 141 aa14.53□□□□□ -0.08
SCN1B-206ENST00000638536 HERC2O95714 4834 aa14.52□□□□□ -0.08
SCN1B-206ENST00000638536 GAGE6Q13070 117 aa14.52□□□□□ -0.08
SCN1B-206ENST00000638536 IQCJQ1A5X6 159 aa14.52□□□□□ -0.08
SCN1B-206ENST00000638536 TRBV25-1A0A075B6N4 114 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 RPS10P46783 165 aaKnown RBP14.52□□□□□ -0.09
SCN1B-206ENST00000638536 TMEM97Q5BJF2 176 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 ATRAIDQ6UW56 229 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 FRZBQ92765 325 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 IGHV1-24A0A0C4DH33 117 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 SMKR1H3BMG3 65 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 CAMPP49913 170 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 CHCHD7Q9BUK0 85 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 RYR1P21817 5038 aa14.5□□□□□ -0.09
SCN1B-206ENST00000638536 LRCOL1A6NCL2 159 aa14.5□□□□□ -0.09
SCN1B-206ENST00000638536 MRPL54Q6P161 138 aaKnown RBP14.5□□□□□ -0.09
SCN1B-206ENST00000638536 MAPKAPK5-AS1Q8N8E1 139 aa14.5□□□□□ -0.09
SCN1B-206ENST00000638536 APOBP04114 4563 aaKnown RBP14.5□□□□□ -0.09
SCN1B-206ENST00000638536 PSCAO43653 123 aa14.49□□□□□ -0.09
SCN1B-206ENST00000638536 PNRC1Q12796 327 aaPredicted RBP14.49□□□□□ -0.09
SCN1B-206ENST00000638536 UBE2WQ96B02 151 aa14.49□□□□□ -0.09
SCN1B-206ENST00000638536 TRAV8-3A0A0A6YYJ7 113 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 TMEM218A2RU14 115 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 SDHAF1A6NFY7 115 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 C16orf90A8MZG2 172 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 NCR2O95944 276 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 RBX1P62877 108 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 KCNIP4Q6PIL6 250 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 UQCC3Q6UW78 93 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 ENHOQ6UWT2 76 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 S100A1P23297 94 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 WFDC2Q14508 124 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 COMMD7Q86VX2 200 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms