RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 C7orf71A4D174 169 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 CRIP1P50238 77 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
LINC00538-201ENST00000626109 NSUN5P1Q3KNT7 163 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
LINC00538-201ENST00000626109 DAZ1Q9NQZ3 744 aaKnown RBP8.7□□□□□ -1.02
LINC00538-201ENST00000626109 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
LINC00538-201ENST00000626109 PLAC8L1A1L4L8 177 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 M0R3E3 92 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 LYZL1Q6UWQ5 148 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 C8orf49Q96NF6 230 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 PLXNB1O43157 2135 aa8.69□□□□□ -1.02
LINC00538-201ENST00000626109 TRAV8-2A0A0B4J237 113 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 LINC01619G3V211 115 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 SH2D1AO60880 128 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 LINC01545Q5VT33 79 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 S4R3C0 116 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 OR2T8A6NH00 312 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 ZNF138P52744 262 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 C12orf74Q32Q52 190 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 FAM104BQ5XKR9 115 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 TMEM158Q8WZ71 300 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 METTL26Q96S19 204 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 U3KQK5 164 aa8.68□□□□□ -1.02
LINC00538-201ENST00000626109 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
LINC00538-201ENST00000626109 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
LINC00538-201ENST00000626109 H3BUA1 57 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 CTSGP08311 255 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
LINC00538-201ENST00000626109 NHLRC4P0CG21 123 aaPredicted RBP8.67□□□□□ -1.02
LINC00538-201ENST00000626109 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
LINC00538-201ENST00000626109 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 OR4X2Q8NGF9 303 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 PRELID3AQ96N28 172 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 ZNF747Q9BV97 191 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 SCRT2Q9NQ03 307 aa8.67□□□□□ -1.02
LINC00538-201ENST00000626109 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 D6R8Y8 96 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 OVOL1O14753 267 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 PROK1P58294 105 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
LINC00538-201ENST00000626109 C10orf99Q6UWK7 81 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 ZFHX3Q15911 3703 aa8.66□□□□□ -1.02
LINC00538-201ENST00000626109 JMJD1CQ15652 2540 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.02
LINC00538-201ENST00000626109 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.02
LINC00538-201ENST00000626109 IGHV3-23P01764 117 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 TRGV3P03979 118 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 CKS2P33552 79 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.02
LINC00538-201ENST00000626109 TWIST1Q15672 202 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 KLK9Q2XQG4 91 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 SLC50A1Q9BRV3 221 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 MAP6D1Q9H9H5 199 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 KLK9Q9UKQ9 250 aa8.65□□□□□ -1.02
LINC00538-201ENST00000626109 CUBNO60494 3623 aa8.65□□□□□ -1.03
LINC00538-201ENST00000626109 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.03
LINC00538-201ENST00000626109 C2CD3Q4AC94 2353 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 J3QQQ9 107 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 PSMB8P28062 276 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 PFN2P35080 140 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 LOC389332A0A1B0GUA5 103 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 FAM223BA6NKX1 122 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 HBDP02042 147 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 C15orf32Q32M92 178 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 BEAN1Q3B7T3 259 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 LGALS9BQ3B8N2 356 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 PSMG4Q5JS54 123 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 LGALS9CQ6DKI2 356 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 FAM223AQ8IWN6 122 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 AMN1Q8IY45 258 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 KLK15Q9H2R5 256 aa8.64□□□□□ -1.03
LINC00538-201ENST00000626109 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 A6NDN8 102 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 COX8AP10176 69 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 MRPL51Q4U2R6 128 aaKnown RBP8.63□□□□□ -1.03
LINC00538-201ENST00000626109 MPV17L2Q567V2 206 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 LCNL1Q6ZST4 164 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 USMG5Q96IX5 58 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 SMAD5-AS1Q9Y6J3 95 aa8.63□□□□□ -1.03
LINC00538-201ENST00000626109 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 PAX4O43316 350 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 CD28P10747 220 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 ATP5G2Q06055 141 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 OR8A1Q8NGG7 326 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 VGLL1Q99990 258 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 DPM2O94777 84 aa8.62□□□□□ -1.03
LINC00538-201ENST00000626109 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
LINC00538-201ENST00000626109 MYOZ3Q8TDC0 251 aa8.61□□□□□ -1.03
LINC00538-201ENST00000626109 CNFNQ9BYD5 112 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms