RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TRAV26-2A0A0B4J265 109 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 J3QQQ9 107 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 K7EIM0 57 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 DCANP1Q8TF63 244 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 DPH3P1Q9H4G8 78 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 GRNP28799 593 aaKnown RBP7.83□□□□□ -1.16
VPS11-207ENST00000620429 SERP2Q8N6R1 65 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 TACC2O95359 2948 aa7.83□□□□□ -1.16
VPS11-207ENST00000620429 TRBV7-1A0A0A6YYK4 115 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 PFN2P35080 140 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 RPL18AQ02543 176 aaKnown RBP7.82□□□□□ -1.16
VPS11-207ENST00000620429 LINC00336Q6ZUF6 198 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 TMEM86BQ8N661 226 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 Q8TAT8 98 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 IGHV4-4A0A075B6R2 117 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 E7EQL1 145 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 COX7A1P24310 79 aa7.82□□□□□ -1.16
VPS11-207ENST00000620429 IGLV1-47P01700 117 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 LGALS3P17931 250 aaKnown RBP7.81□□□□□ -1.16
VPS11-207ENST00000620429 RPL35AP18077 110 aaKnown RBP7.81□□□□□ -1.16
VPS11-207ENST00000620429 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
VPS11-207ENST00000620429 RNF152Q8N8N0 203 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 SLC50A1Q9BRV3 221 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 LYNX1G3V0Z9 82 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 BUB1B-PAK6H3BSN5 160 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 LYNX1P0DP58 116 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 EEF1AKMT3Q96AZ1 226 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 MAST4O15021 2626 aa7.81□□□□□ -1.16
VPS11-207ENST00000620429 IGHV1-69DA0A0B4J2H0 117 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 A0A0J9YX75 114 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 NDUFC2-KCTD14E9PQ53 114 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 UBE2E1P51965 193 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 CDSNQ15517 529 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 RNASE6Q93091 150 aaKnown RBP7.8□□□□□ -1.16
VPS11-207ENST00000620429 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 EPM2AB3EWF7 344 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 IGFL4Q6B9Z1 124 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 DYNLRB1Q9NP97 96 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 V9GYY9 64 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 SDHAF1A6NFY7 115 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 KAAG1Q9UBP8 84 aa7.8□□□□□ -1.16
VPS11-207ENST00000620429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.79□□□□□ -1.16
VPS11-207ENST00000620429 PSMB8P28062 276 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 ZNF415Q09FC8 603 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 PTPN13Q12923 2485 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 LEPROTO15243 131 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 TSHBP01222 138 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 CLEC2BQ92478 149 aa7.79□□□□□ -1.16
VPS11-207ENST00000620429 IGKV3D-20A0A0C4DH25 116 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 SPRY2O43597 315 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 RHOHQ15669 191 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 DAND5Q8N907 189 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 ABCA4P78363 2273 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 EDN2P20800 178 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 PRIMA1Q86XR5 153 aa7.78□□□□□ -1.16
VPS11-207ENST00000620429 IGIPA6NJ69 53 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 RNF223E7ERA6 249 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 KRTAP21-3Q3LHN1 58 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 C10orf105Q8TEF2 133 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 ANKHD1Q8IWZ3 2542 aaKnown RBP7.77□□□□□ -1.17
VPS11-207ENST00000620429 IGHV3-23P01764 117 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 TMEM141Q96I45 108 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 PKIGQ9Y2B9 76 aa7.77□□□□□ -1.17
VPS11-207ENST00000620429 M0R381 172 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 LY6HO94772 140 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 ZNF876PQ49A33 203 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 RNF5Q99942 180 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 HRNRQ86YZ3 2850 aaPredicted RBP7.76□□□□□ -1.17
VPS11-207ENST00000620429 SVEP1Q4LDE5 3571 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 TRAV8-3A0A0A6YYJ7 113 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 I3L3M4 83 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 CCL21O00585 134 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 NDUFC2O95298 119 aa7.76□□□□□ -1.17
VPS11-207ENST00000620429 NBR2O15453 112 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 NSUN5P1Q3KNT7 163 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 ARHGAP32A7KAX9 2087 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 DOPEY2Q9Y3R5 2298 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 GNLYP22749 145 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 NPC2P61916 151 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 SPANXN1Q5VSR9 72 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 FANCD2OSQ96PS1 177 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 C11orf21Q9P2W6 132 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 NAV2Q8IVL1 2488 aa7.75□□□□□ -1.17
VPS11-207ENST00000620429 TRAV12-2A0A075B6T6 113 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 IGHV3-35A0A0C4DH35 117 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 IGLV11-55A0A075B6I3 123 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 A0A0J9YXY3 114 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 F8W735 103 aaPredicted RBP7.74□□□□□ -1.17
VPS11-207ENST00000620429 SYNJ2BPP57105 145 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 DYNAPQ8N1N2 210 aa7.74□□□□□ -1.17
VPS11-207ENST00000620429 LITAFQ99732 161 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms