RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
CNOT3-209ENST00000617930 HLA-DRB4P13762 266 aa12.87□□□□□ -0.35
CNOT3-209ENST00000617930 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
CNOT3-209ENST00000617930 C9orf85Q96MD7 179 aa12.87□□□□□ -0.35
CNOT3-209ENST00000617930 TTTY13Q9BZ97 58 aa12.87□□□□□ -0.35
CNOT3-209ENST00000617930 MRPL35Q9NZE8 188 aaKnown RBP12.87□□□□□ -0.35
CNOT3-209ENST00000617930 HLA-DRB4X5D2U9 266 aa12.87□□□□□ -0.35
CNOT3-209ENST00000617930 K7EP34 96 aa12.86□□□□□ -0.35
CNOT3-209ENST00000617930 DYNLRB2Q8TF09 96 aa12.86□□□□□ -0.35
CNOT3-209ENST00000617930 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
CNOT3-209ENST00000617930 A0A087WX48 190 aa12.86□□□□□ -0.35
CNOT3-209ENST00000617930 MAST4O15021 2626 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 VWFP04275 2813 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 IGHV1OR15-1A0A075B7D0 117 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
CNOT3-209ENST00000617930 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 NSUN5P1Q3KNT7 163 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 UFSP1Q6NVU6 142 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 POM121L12Q8N7R1 296 aa12.85□□□□□ -0.35
CNOT3-209ENST00000617930 MGPP08493 103 aa12.84□□□□□ -0.35
CNOT3-209ENST00000617930 ORMDL2Q53FV1 153 aa12.84□□□□□ -0.35
CNOT3-209ENST00000617930 ATRQ13535 2644 aa12.84□□□□□ -0.35
CNOT3-209ENST00000617930 PLNP26678 52 aa12.84□□□□□ -0.35
CNOT3-209ENST00000617930 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
CNOT3-209ENST00000617930 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
CNOT3-209ENST00000617930 TRBV25-1A0A075B6N4 114 aa12.83□□□□□ -0.36
CNOT3-209ENST00000617930 A0A1W2PPM0 123 aa12.83□□□□□ -0.36
CNOT3-209ENST00000617930 SUMO2P61956 95 aaKnown RBP12.83□□□□□ -0.36
CNOT3-209ENST00000617930 A0A087WWL8 130 aa12.83□□□□□ -0.36
CNOT3-209ENST00000617930 K7ERU9 68 aa12.83□□□□□ -0.36
CNOT3-209ENST00000617930 FXYD2P54710 66 aa12.83□□□□□ -0.36
CNOT3-209ENST00000617930 SPATA3Q8NHX4 192 aa12.83□□□□□ -0.36
CNOT3-209ENST00000617930 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
CNOT3-209ENST00000617930 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
CNOT3-209ENST00000617930 SPCS1Q9Y6A9 102 aa12.82□□□□□ -0.36
CNOT3-209ENST00000617930 FBN1P35555 2871 aaKnown RBP12.82□□□□□ -0.36
CNOT3-209ENST00000617930 SCGB3A1Q96QR1 104 aa12.81□□□□□ -0.36
CNOT3-209ENST00000617930 TRAV12-1A0A0B4J245 112 aa12.81□□□□□ -0.36
CNOT3-209ENST00000617930 H7C1H1 209 aa12.81□□□□□ -0.36
CNOT3-209ENST00000617930 FABP2P12104 132 aa12.81□□□□□ -0.36
CNOT3-209ENST00000617930 F8VRH5 84 aa12.8□□□□□ -0.36
CNOT3-209ENST00000617930 CEND1Q8N111 149 aa12.8□□□□□ -0.36
CNOT3-209ENST00000617930 OR5A1Q8NGJ0 315 aa12.8□□□□□ -0.36
CNOT3-209ENST00000617930 TOMM6Q96B49 74 aa12.8□□□□□ -0.36
CNOT3-209ENST00000617930 CHTOPQ9Y3Y2 248 aaKnown RBP12.8□□□□□ -0.36
CNOT3-209ENST00000617930 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
CNOT3-209ENST00000617930 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
CNOT3-209ENST00000617930 K7EMI3 77 aa12.79□□□□□ -0.36
CNOT3-209ENST00000617930 CRYGDP07320 174 aa12.79□□□□□ -0.36
CNOT3-209ENST00000617930 NHP2Q9NX24 153 aaKnown RBP12.79□□□□□ -0.36
CNOT3-209ENST00000617930 HTN1P15515 57 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 TRAV25A0A0B4J276 109 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 K7ERJ3 54 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 NEGR1Q7Z3B1 354 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 NDUFA11Q86Y39 141 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 MAPKAPK5-AS1Q8N8E1 139 aa12.78□□□□□ -0.36
CNOT3-209ENST00000617930 PPP1R17O96001 155 aa12.77□□□□□ -0.37
CNOT3-209ENST00000617930 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
CNOT3-209ENST00000617930 C2orf66Q6UXQ4 117 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 TM2D2Q9BX73 214 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 TAL2Q16559 108 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 KRTAP24-1Q3LI83 254 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
CNOT3-209ENST00000617930 ZNF876PQ49A33 203 aa12.75□□□□□ -0.37
CNOT3-209ENST00000617930 FAM74A4Q5TZK3 123 aa12.75□□□□□ -0.37
CNOT3-209ENST00000617930 PRIMA1Q86XR5 153 aa12.75□□□□□ -0.37
CNOT3-209ENST00000617930 SAP30O75446 220 aa12.74□□□□□ -0.37
CNOT3-209ENST00000617930 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
CNOT3-209ENST00000617930 HIST1H4GQ99525 98 aa12.74□□□□□ -0.37
CNOT3-209ENST00000617930 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
CNOT3-209ENST00000617930 CITED1Q99966 193 aa12.74□□□□□ -0.37
CNOT3-209ENST00000617930 TRGV11A0A075B6L2 103 aa12.73□□□□□ -0.37
CNOT3-209ENST00000617930 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
CNOT3-209ENST00000617930 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
CNOT3-209ENST00000617930 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
CNOT3-209ENST00000617930 M0QY20 66 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
CNOT3-209ENST00000617930 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 PHLDA1Q8WV24 401 aaPredicted RBP12.72□□□□□ -0.37
CNOT3-209ENST00000617930 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 F5H697 171 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
CNOT3-209ENST00000617930 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.37
CNOT3-209ENST00000617930 SYT8Q8NBV8 401 aa12.71□□□□□ -0.37
CNOT3-209ENST00000617930 AZU1P20160 251 aa12.71□□□□□ -0.38
CNOT3-209ENST00000617930 CYSLTR1Q9Y271 337 aa12.71□□□□□ -0.38
CNOT3-209ENST00000617930 PRSS29PA6NIE9 313 aa12.7□□□□□ -0.38
CNOT3-209ENST00000617930 GIG44P09565 113 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-209ENST00000617930 LINC01587Q99440 93 aa12.7□□□□□ -0.38
CNOT3-209ENST00000617930 COTL1Q14019 142 aa12.69□□□□□ -0.38
CNOT3-209ENST00000617930 IGLL5B9A064 214 aa12.69□□□□□ -0.38
CNOT3-209ENST00000617930 ZNF56Q15929 161 aa12.69□□□□□ -0.38
CNOT3-209ENST00000617930 C12orf74Q32Q52 190 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms