RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 Q6YL49 198 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 C22orf34Q6ZV56 151 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 TMEM263Q8WUH6 116 aaKnown RBP11.93□□□□□ -0.5
TNXB-208ENST00000611016 VSIG2Q96IQ7 327 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 PLCE1Q9P212 2302 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 ODF3BA8MYP8 253 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
TNXB-208ENST00000611016 BAALCQ8WXS3 180 aa11.93□□□□□ -0.5
TNXB-208ENST00000611016 ATOX1O00244 68 aa11.92□□□□□ -0.5
TNXB-208ENST00000611016 MP68P56378 58 aa11.92□□□□□ -0.5
TNXB-208ENST00000611016 KLK12Q9UKR0 248 aa11.92□□□□□ -0.5
TNXB-208ENST00000611016 A0A0J9YX75 114 aa11.92□□□□□ -0.5
TNXB-208ENST00000611016 MDFICQ9P1T7 246 aa11.92□□□□□ -0.5
TNXB-208ENST00000611016 A4D1N5 150 aa11.91□□□□□ -0.5
TNXB-208ENST00000611016 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
TNXB-208ENST00000611016 H3BT86 120 aa11.91□□□□□ -0.5
TNXB-208ENST00000611016 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
TNXB-208ENST00000611016 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
TNXB-208ENST00000611016 TEN1Q86WV5 123 aa11.9□□□□□ -0.5
TNXB-208ENST00000611016 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
TNXB-208ENST00000611016 C14orf177Q52M58 125 aa11.9□□□□□ -0.5
TNXB-208ENST00000611016 HIVEP2P31629 2446 aa11.9□□□□□ -0.5
TNXB-208ENST00000611016 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 IGHV1-58A0A0C4DH39 117 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 C19orf71A6NCJ1 209 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 NUPR1O60356 82 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 RBM3P98179 157 aaKnown RBP11.89□□□□□ -0.51
TNXB-208ENST00000611016 OBSL1O75147 1896 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 DIRC1Q969H9 104 aa11.89□□□□□ -0.51
TNXB-208ENST00000611016 PRO0255Q9UI72 69 aa11.88□□□□□ -0.51
TNXB-208ENST00000611016 NREPQ16612 68 aa11.88□□□□□ -0.51
TNXB-208ENST00000611016 H7C423 109 aa11.88□□□□□ -0.51
TNXB-208ENST00000611016 LGALS9O00182 355 aa11.88□□□□□ -0.51
TNXB-208ENST00000611016 UBE2AP49459 152 aa11.88□□□□□ -0.51
TNXB-208ENST00000611016 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
TNXB-208ENST00000611016 NCR3O14931 201 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 C11orf1Q9H5F2 150 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 LINC00173Q6ZV60 143 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 CUL9Q8IWT3 2517 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 NOTCH2Q04721 2471 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 SPAG11BQ08648 103 aa11.87□□□□□ -0.51
TNXB-208ENST00000611016 SMIM9A6NGZ8 99 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 P0C879 139 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 ACACBO00763 2458 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 COL4A4P53420 1690 aaPredicted RBP11.86□□□□□ -0.51
TNXB-208ENST00000611016 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 DAND5Q8N907 189 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 TMEM256-PLSCR3K7ERE1 68 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 SPATA12Q7Z6I5 190 aa11.86□□□□□ -0.51
TNXB-208ENST00000611016 A0A1B0GX51 115 aa11.85□□□□□ -0.51
TNXB-208ENST00000611016 IGHV4-28A0A0C4DH34 117 aa11.85□□□□□ -0.51
TNXB-208ENST00000611016 PSMB8P28062 276 aa11.85□□□□□ -0.51
TNXB-208ENST00000611016 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
TNXB-208ENST00000611016 SPG11Q96JI7 2443 aa11.84□□□□□ -0.51
TNXB-208ENST00000611016 IGF1P05019 195 aa11.84□□□□□ -0.51
TNXB-208ENST00000611016 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
TNXB-208ENST00000611016 RS1O15537 224 aa11.84□□□□□ -0.51
TNXB-208ENST00000611016 ODF1Q14990 250 aa11.84□□□□□ -0.51
TNXB-208ENST00000611016 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
TNXB-208ENST00000611016 CHKB-CPT1BH3BT56 60 aa11.83□□□□□ -0.52
TNXB-208ENST00000611016 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
TNXB-208ENST00000611016 LY6G6DO95868 133 aa11.83□□□□□ -0.52
TNXB-208ENST00000611016 TP53TG3Q9ULZ0 132 aa11.83□□□□□ -0.52
TNXB-208ENST00000611016 ZNF106Q9H2Y7 1883 aaKnown RBP11.83□□□□□ -0.52
TNXB-208ENST00000611016 LYRM9A8MSI8 78 aa11.82□□□□□ -0.52
TNXB-208ENST00000611016 Q6ZSV7 163 aa11.82□□□□□ -0.52
TNXB-208ENST00000611016 DEFB114Q30KQ6 69 aa11.82□□□□□ -0.52
TNXB-208ENST00000611016 Q6ZTI0 123 aa11.82□□□□□ -0.52
TNXB-208ENST00000611016 TNCP24821 2201 aa11.82□□□□□ -0.52
TNXB-208ENST00000611016 KIAA1549LQ6ZVL6 1849 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 C4orf48Q5BLP8 95 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 A0A1B0GXF2 115 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 CHD3Q12873 2000 aaKnown RBP11.81□□□□□ -0.52
TNXB-208ENST00000611016 HIGD2BQ4VC39 106 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 C11orf71Q6IPW1 123 aa11.81□□□□□ -0.52
TNXB-208ENST00000611016 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
TNXB-208ENST00000611016 FXYD2P54710 66 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 MIAQ16674 131 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 SHISA2Q6UWI4 295 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 B9D2Q9BPU9 175 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 HIST2H2BDQ6DRA6 164 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 TAX1BP3O14907 124 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 P0DMU3 169 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 FAM231AP0DMU4 169 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 FAM231CP0DMU5 169 aa11.8□□□□□ -0.52
TNXB-208ENST00000611016 PCDH15Q96QU1 1955 aa11.79□□□□□ -0.52
TNXB-208ENST00000611016 COX7BP24311 80 aa11.79□□□□□ -0.52
TNXB-208ENST00000611016 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
TNXB-208ENST00000611016 LECT2O14960 151 aa11.79□□□□□ -0.52
TNXB-208ENST00000611016 HILS1P60008 231 aa11.79□□□□□ -0.52
TNXB-208ENST00000611016 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
TNXB-208ENST00000611016 RNF183Q96D59 192 aa11.79□□□□□ -0.52
TNXB-208ENST00000611016 ZNF80P51504 273 aaPredicted RBP11.78□□□□□ -0.52
TNXB-208ENST00000611016 MIR7-3HGQ8N6C7 128 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms