RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 Q8N3U1 123 aa13.6□□□□□ -0.23
SSBP4-210ENST00000601444 GFRA4Q9GZZ7 299 aa13.6□□□□□ -0.23
SSBP4-210ENST00000601444 IGHV3-30P01768 117 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 IGHV3-33P01772 117 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 IGHV3-30-3P0DP02 117 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 IGHV3-30-5P0DP03 117 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 TNP2Q05952 138 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 NUP35Q8NFH5 326 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 HECTD4Q9Y4D8 3996 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 PKD1P98161 4303 aa13.58□□□□□ -0.24
SSBP4-210ENST00000601444 TRAV9-2A0A087WT02 112 aa13.57□□□□□ -0.24
SSBP4-210ENST00000601444 TRAV26-2A0A0B4J265 109 aa13.57□□□□□ -0.24
SSBP4-210ENST00000601444 A0A1B0GVY2 172 aa13.57□□□□□ -0.24
SSBP4-210ENST00000601444 FAM231BA6NCW3 169 aa13.57□□□□□ -0.24
SSBP4-210ENST00000601444 LINC01556Q5JQF7 62 aa13.57□□□□□ -0.24
SSBP4-210ENST00000601444 A0A087WWC5 75 aa13.56□□□□□ -0.24
SSBP4-210ENST00000601444 A0A1B0GUT8 65 aa13.56□□□□□ -0.24
SSBP4-210ENST00000601444 BORCS7Q96B45 105 aa13.56□□□□□ -0.24
SSBP4-210ENST00000601444 H7C1H1 209 aa13.55□□□□□ -0.24
SSBP4-210ENST00000601444 RASL11AQ6T310 242 aa13.55□□□□□ -0.24
SSBP4-210ENST00000601444 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
SSBP4-210ENST00000601444 SMIM27A0A1W2PRY6 76 aa13.54□□□□□ -0.24
SSBP4-210ENST00000601444 Q6ZRN7 208 aaPredicted RBP13.54□□□□□ -0.24
SSBP4-210ENST00000601444 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
SSBP4-210ENST00000601444 NAT8BQ9UHF3 227 aa13.54□□□□□ -0.24
SSBP4-210ENST00000601444 NTM-AS1Q6ZSK4 140 aa13.53□□□□□ -0.24
SSBP4-210ENST00000601444 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
SSBP4-210ENST00000601444 NIT2Q9NQR4 276 aa13.53□□□□□ -0.24
SSBP4-210ENST00000601444 DNAH11Q96DT5 4516 aa13.52□□□□□ -0.24
SSBP4-210ENST00000601444 TRBV6-8A0A0A6YYG3 113 aa13.52□□□□□ -0.25
SSBP4-210ENST00000601444 K7EP13 123 aa13.52□□□□□ -0.25
SSBP4-210ENST00000601444 BTF3P20290 206 aaKnown RBP13.52□□□□□ -0.25
SSBP4-210ENST00000601444 DAZ4Q86SG3 579 aaKnown RBP13.52□□□□□ -0.25
SSBP4-210ENST00000601444 NIT1Q86X76 327 aa13.52□□□□□ -0.25
SSBP4-210ENST00000601444 DEFB104AQ8WTQ1 72 aa13.52□□□□□ -0.25
SSBP4-210ENST00000601444 DAZ3Q9NR90 486 aaKnown RBP13.52□□□□□ -0.25
SSBP4-210ENST00000601444 BIRC6Q9NR09 4857 aa13.51□□□□□ -0.25
SSBP4-210ENST00000601444 IBA57-AS1B1ANH7 110 aa13.51□□□□□ -0.25
SSBP4-210ENST00000601444 GAS8-AS1O95177 125 aa13.51□□□□□ -0.25
SSBP4-210ENST00000601444 C10orf126Q8N4M7 172 aa13.51□□□□□ -0.25
SSBP4-210ENST00000601444 RPL39LQ96EH5 51 aaKnown RBP13.51□□□□□ -0.25
SSBP4-210ENST00000601444 ADCYAP1P18509 176 aa13.5□□□□□ -0.25
SSBP4-210ENST00000601444 RIGQ13278 110 aa13.5□□□□□ -0.25
SSBP4-210ENST00000601444 UQCC3Q6UW78 93 aa13.5□□□□□ -0.25
SSBP4-210ENST00000601444 RNF185Q96GF1 192 aa13.5□□□□□ -0.25
SSBP4-210ENST00000601444 TMEM191AQ9H0A3 160 aa13.5□□□□□ -0.25
SSBP4-210ENST00000601444 TMEM218A2RU14 115 aa13.49□□□□□ -0.25
SSBP4-210ENST00000601444 COMMD7Q86VX2 200 aa13.49□□□□□ -0.25
SSBP4-210ENST00000601444 AMN1Q8IY45 258 aa13.49□□□□□ -0.25
SSBP4-210ENST00000601444 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-210ENST00000601444 RAB4AP20338 218 aa13.48□□□□□ -0.25
SSBP4-210ENST00000601444 PNRC1Q12796 327 aaPredicted RBP13.48□□□□□ -0.25
SSBP4-210ENST00000601444 Q9HAA7 133 aa13.48□□□□□ -0.25
SSBP4-210ENST00000601444 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
SSBP4-210ENST00000601444 TMEM262E9PQX1 116 aa13.46□□□□□ -0.25
SSBP4-210ENST00000601444 F8W036 122 aa13.46□□□□□ -0.25
SSBP4-210ENST00000601444 CAMPP49913 170 aa13.46□□□□□ -0.25
SSBP4-210ENST00000601444 CHCHD5Q9BSY4 110 aa13.46□□□□□ -0.25
SSBP4-210ENST00000601444 URGCP-MRPS24S4R325 110 aa13.46□□□□□ -0.25
SSBP4-210ENST00000601444 LINC00862A6NCI5 91 aa13.45□□□□□ -0.26
SSBP4-210ENST00000601444 TMEM97Q5BJF2 176 aa13.45□□□□□ -0.26
SSBP4-210ENST00000601444 MRPL54Q6P161 138 aaKnown RBP13.45□□□□□ -0.26
SSBP4-210ENST00000601444 FRZBQ92765 325 aa13.45□□□□□ -0.26
SSBP4-210ENST00000601444 A0A087WX48 190 aa13.44□□□□□ -0.26
SSBP4-210ENST00000601444 SMKR1H3BMG3 65 aa13.44□□□□□ -0.26
SSBP4-210ENST00000601444 PPP1R2P9O14990 202 aa13.44□□□□□ -0.26
SSBP4-210ENST00000601444 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
SSBP4-210ENST00000601444 MPV17L2Q567V2 206 aa13.44□□□□□ -0.26
SSBP4-210ENST00000601444 KLK12Q9UKR0 248 aa13.44□□□□□ -0.26
SSBP4-210ENST00000601444 PKHD1P08F94 4074 aa13.44□□□□□ -0.26
SSBP4-210ENST00000601444 TRBV25-1A0A075B6N4 114 aa13.43□□□□□ -0.26
SSBP4-210ENST00000601444 IGHV1-24A0A0C4DH33 117 aa13.43□□□□□ -0.26
SSBP4-210ENST00000601444 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
SSBP4-210ENST00000601444 GAGE6Q13070 117 aa13.43□□□□□ -0.26
SSBP4-210ENST00000601444 IQCJQ1A5X6 159 aa13.43□□□□□ -0.26
SSBP4-210ENST00000601444 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
SSBP4-210ENST00000601444 A0A1B0GXF2 115 aa13.42□□□□□ -0.26
SSBP4-210ENST00000601444 NCR2O95944 276 aa13.42□□□□□ -0.26
SSBP4-210ENST00000601444 LAGE3Q14657 143 aa13.42□□□□□ -0.26
SSBP4-210ENST00000601444 KCNIP4Q6PIL6 250 aa13.42□□□□□ -0.26
SSBP4-210ENST00000601444 ATRAIDQ6UW56 229 aa13.42□□□□□ -0.26
SSBP4-210ENST00000601444 Q8N976 141 aa13.42□□□□□ -0.26
SSBP4-210ENST00000601444 DYNC1H1Q14204 4646 aaKnown RBP13.41□□□□□ -0.26
SSBP4-210ENST00000601444 SDHAF1A6NFY7 115 aa13.41□□□□□ -0.26
SSBP4-210ENST00000601444 FAM104BQ5XKR9 115 aa13.41□□□□□ -0.26
SSBP4-210ENST00000601444 MRAP2Q96G30 205 aa13.41□□□□□ -0.26
SSBP4-210ENST00000601444 CHCHD7Q9BUK0 85 aa13.41□□□□□ -0.26
SSBP4-210ENST00000601444 SEC11CQ9BY50 192 aa13.41□□□□□ -0.26
SSBP4-210ENST00000601444 TRBV6-5A0A0K0K1A5 114 aa13.4□□□□□ -0.26
SSBP4-210ENST00000601444 HBBP68871 147 aa13.4□□□□□ -0.26
SSBP4-210ENST00000601444 COTL1Q14019 142 aa13.4□□□□□ -0.26
SSBP4-210ENST00000601444 MRPL51Q4U2R6 128 aaKnown RBP13.4□□□□□ -0.26
SSBP4-210ENST00000601444 A0A1B0GW15 77 aa13.39□□□□□ -0.27
SSBP4-210ENST00000601444 KRTAP10-2P60368 255 aa13.39□□□□□ -0.27
SSBP4-210ENST00000601444 SPATA12Q7Z6I5 190 aa13.39□□□□□ -0.27
SSBP4-210ENST00000601444 TMEM243Q9BU79 118 aa13.39□□□□□ -0.27
SSBP4-210ENST00000601444 A0A087WTM6 91 aa13.38□□□□□ -0.27
SSBP4-210ENST00000601444 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
SSBP4-210ENST00000601444 FUSP35637 526 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSBP4-210ENST00000601444 AMTP48728 403 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms