RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 PRSS47A8MTI9 375 aa12.74□□□□□ -0.37
SHKBP1-224ENST00000600718 IGHV4-30-4P0DP06 118 aa12.74□□□□□ -0.37
SHKBP1-224ENST00000600718 Q6ZVH6 145 aa12.74□□□□□ -0.37
SHKBP1-224ENST00000600718 FA2HQ7L5A8 372 aa12.74□□□□□ -0.37
SHKBP1-224ENST00000600718 RASL10AQ92737 203 aa12.74□□□□□ -0.37
SHKBP1-224ENST00000600718 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
SHKBP1-224ENST00000600718 FAM74A4Q5TZK3 123 aa12.73□□□□□ -0.37
SHKBP1-224ENST00000600718 F5H697 171 aa12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 DAZ2Q13117 558 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 SVIPQ8NHG7 77 aa12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 MDFIQ99750 246 aa12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 MRPL16Q9NX20 251 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 SMIM9A6NGZ8 99 aa12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 LGALS9BQ3B8N2 356 aa12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 NXT2Q9NPJ8 142 aaKnown RBP12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
SHKBP1-224ENST00000600718 SUMO4Q6EEV6 95 aa12.71□□□□□ -0.37
SHKBP1-224ENST00000600718 C20orf78Q9BR46 151 aa12.71□□□□□ -0.37
SHKBP1-224ENST00000600718 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.38
SHKBP1-224ENST00000600718 PLAC8L1A1L4L8 177 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 SPATA12Q7Z6I5 190 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 G3V4G9 280 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 RS1O15537 224 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 VAMP3Q15836 100 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 ZNF56Q15929 161 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 CFAP126Q5VTH2 177 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 UFSP1Q6NVU6 142 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
SHKBP1-224ENST00000600718 TRGV1A0A0A0MS02 117 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 A8MZ25 164 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 RHODO00212 210 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 SAMD5Q5TGI4 173 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 Q8N8P6 123 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 NOP10Q9NPE3 64 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-224ENST00000600718 TAX1BP3O14907 124 aa12.68□□□□□ -0.38
SHKBP1-224ENST00000600718 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-224ENST00000600718 SLC25A34Q6PIV7 304 aa12.68□□□□□ -0.38
SHKBP1-224ENST00000600718 X6R8D5 127 aa12.68□□□□□ -0.38
SHKBP1-224ENST00000600718 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 IGHV1-24A0A0C4DH33 117 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 M0QY20 66 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 MPV17L2Q567V2 206 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 BVES-AS1Q5T3Y7 98 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 ZFP2Q6ZN57 461 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 Q6ZTI0 123 aa12.67□□□□□ -0.38
SHKBP1-224ENST00000600718 TRRAPQ9Y4A5 3859 aa12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 HSBP1L1C9JCN9 74 aa12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 H7C1H1 209 aa12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 DEFB135Q30KP9 77 aa12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-224ENST00000600718 IGHV3-73A0A0B4J1V6 119 aa12.65□□□□□ -0.38
SHKBP1-224ENST00000600718 TRBV6-5A0A0K0K1A5 114 aa12.65□□□□□ -0.38
SHKBP1-224ENST00000600718 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-224ENST00000600718 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
SHKBP1-224ENST00000600718 STAB1Q9NY15 2570 aa12.65□□□□□ -0.38
SHKBP1-224ENST00000600718 NUDT3O95989 172 aa12.65□□□□□ -0.38
SHKBP1-224ENST00000600718 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
SHKBP1-224ENST00000600718 OR11H2Q8NH07 326 aa12.64□□□□□ -0.39
SHKBP1-224ENST00000600718 RNF183Q96D59 192 aa12.64□□□□□ -0.39
SHKBP1-224ENST00000600718 CST9LQ9H4G1 147 aa12.64□□□□□ -0.39
SHKBP1-224ENST00000600718 RNF151Q2KHN1 245 aa12.63□□□□□ -0.39
SHKBP1-224ENST00000600718 hDV102S1A0JD36 115 aa12.63□□□□□ -0.39
SHKBP1-224ENST00000600718 K7EMI3 77 aa12.63□□□□□ -0.39
SHKBP1-224ENST00000600718 CIDEAO60543 219 aa12.63□□□□□ -0.39
SHKBP1-224ENST00000600718 POLR2KP53803 58 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-224ENST00000600718 MAP1LC3CQ9BXW4 147 aa12.63□□□□□ -0.39
SHKBP1-224ENST00000600718 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 COL6A5A8TX70 2615 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 GAGE7O76087 117 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 IGHV3-53P01767 116 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 OCIAD2Q56VL3 154 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 HSPB8Q9UJY1 196 aa12.62□□□□□ -0.39
SHKBP1-224ENST00000600718 VCYO14598 125 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 HBDP02042 147 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 EMP1P54849 157 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 LAGE3Q14657 143 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 PMCHL2Q9BQD1 86 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 MIFP14174 115 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 FCER1GP30273 86 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 Q6ZSN1 163 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 LINC00173Q6ZV60 143 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
SHKBP1-224ENST00000600718 A0A096LNJ9 63 aa12.6□□□□□ -0.39
SHKBP1-224ENST00000600718 SDHAF1A6NFY7 115 aa12.6□□□□□ -0.39
SHKBP1-224ENST00000600718 ORMDL2Q53FV1 153 aa12.6□□□□□ -0.39
SHKBP1-224ENST00000600718 LINC00612Q8N6U2 182 aa12.6□□□□□ -0.39
SHKBP1-224ENST00000600718 TP73-AS1Q9UF72 201 aa12.6□□□□□ -0.39
SHKBP1-224ENST00000600718 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
SHKBP1-224ENST00000600718 LINC01545Q5VT33 79 aa12.59□□□□□ -0.39
SHKBP1-224ENST00000600718 DNAJC30Q96LL9 226 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms