RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TRBV7-3A0A075B6L6 115 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 SRIP30626 198 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 RPL36AP83881 106 aaKnown RBP8.35□□□□□ -1.07
APOC1-206ENST00000590334 COX19Q49B96 90 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 MRPL51Q4U2R6 128 aaKnown RBP8.35□□□□□ -1.07
APOC1-206ENST00000590334 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 RPL36ALQ969Q0 106 aaKnown RBP8.35□□□□□ -1.07
APOC1-206ENST00000590334 NIT2Q9NQR4 276 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 SMCO4Q9NRQ5 59 aa8.35□□□□□ -1.07
APOC1-206ENST00000590334 ALMS1Q8TCU4 4167 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 TRAV26-2A0A0B4J265 109 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 S100A1P23297 94 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 UBE2D3P61077 147 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 UBE2D2P62837 147 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
APOC1-206ENST00000590334 TGIF2-C20orf24A0A0A6YYL0 155 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 TRBV6-5A0A0K0K1A5 114 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 GAGE12JA6NER3 117 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 TIRAPP58753 221 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 GAGE1Q13065 139 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 GAGE4Q13068 117 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 GAGE5Q13069 117 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 ESRGQ1W209 222 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 GAGE13Q4V321 117 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 CBLN2Q8IUK8 224 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
APOC1-206ENST00000590334 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 PPP1R17O96001 155 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 PPBPP02775 128 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 LGALS9CQ6DKI2 356 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 LYPD5Q6UWN5 251 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 NRACQ8N912 160 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
APOC1-206ENST00000590334 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
APOC1-206ENST00000590334 MT-ND6P03923 174 aa8.31□□□□□ -1.08
APOC1-206ENST00000590334 CKS2P33552 79 aa8.31□□□□□ -1.08
APOC1-206ENST00000590334 RPS10P46783 165 aaKnown RBP8.31□□□□□ -1.08
APOC1-206ENST00000590334 CCL18P55774 89 aa8.31□□□□□ -1.08
APOC1-206ENST00000590334 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
APOC1-206ENST00000590334 GTSF1LQ9H1H1 148 aa8.31□□□□□ -1.08
APOC1-206ENST00000590334 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
APOC1-206ENST00000590334 D6R8Y8 96 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 SMKR1H3BMG3 65 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 PHOX2AO14813 284 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 NCR2O95944 276 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 ORMDL3Q8N138 153 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 LINC00476Q8WZB0 136 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
APOC1-206ENST00000590334 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
APOC1-206ENST00000590334 APCSP02743 223 aa8.29□□□□□ -1.08
APOC1-206ENST00000590334 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
APOC1-206ENST00000590334 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
APOC1-206ENST00000590334 LAMTOR2Q9Y2Q5 125 aa8.29□□□□□ -1.08
APOC1-206ENST00000590334 SDHAF1A6NFY7 115 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 PRSS47A8MTI9 375 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 TNFRSF6BO95407 300 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
APOC1-206ENST00000590334 RPL32P62910 135 aaKnown RBP8.28□□□□□ -1.08
APOC1-206ENST00000590334 TMEM97Q5BJF2 176 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 LELP1Q5T871 98 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.28□□□□□ -1.08
APOC1-206ENST00000590334 PRELID3AQ96N28 172 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 C20orf78Q9BR46 151 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
APOC1-206ENST00000590334 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
APOC1-206ENST00000590334 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
APOC1-206ENST00000590334 COLCA2A8K830 154 aa8.27□□□□□ -1.09
APOC1-206ENST00000590334 SCO1O75880 301 aa8.27□□□□□ -1.09
APOC1-206ENST00000590334 NPYP01303 97 aa8.27□□□□□ -1.09
APOC1-206ENST00000590334 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
APOC1-206ENST00000590334 NTM-AS1Q6ZSK4 140 aa8.27□□□□□ -1.09
APOC1-206ENST00000590334 TRBV6-8A0A0A6YYG3 113 aa8.26□□□□□ -1.09
APOC1-206ENST00000590334 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
APOC1-206ENST00000590334 LCE6AA0A183 80 aa8.26□□□□□ -1.09
APOC1-206ENST00000590334 UBE2DNLQ8IWF7 75 aa8.26□□□□□ -1.09
APOC1-206ENST00000590334 TRAPPC1Q9Y5R8 145 aa8.26□□□□□ -1.09
APOC1-206ENST00000590334 I3L3M4 83 aa8.25□□□□□ -1.09
APOC1-206ENST00000590334 VCYO14598 125 aa8.25□□□□□ -1.09
APOC1-206ENST00000590334 LY6G6CO95867 125 aa8.25□□□□□ -1.09
APOC1-206ENST00000590334 FABP9Q0Z7S8 132 aa8.25□□□□□ -1.09
APOC1-206ENST00000590334 IQCJQ1A5X6 159 aa8.25□□□□□ -1.09
APOC1-206ENST00000590334 KIAA1644Q3SXP7 199 aa8.25□□□□□ -1.09
APOC1-206ENST00000590334 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
APOC1-206ENST00000590334 SACSQ9NZJ4 4579 aa8.24□□□□□ -1.09
APOC1-206ENST00000590334 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
APOC1-206ENST00000590334 TSHBP01222 138 aa8.24□□□□□ -1.09
APOC1-206ENST00000590334 PMCHP20382 165 aa8.24□□□□□ -1.09
APOC1-206ENST00000590334 COTL1Q14019 142 aa8.24□□□□□ -1.09
APOC1-206ENST00000590334 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
APOC1-206ENST00000590334 IGLV2-18A0A075B6J9 118 aa8.23□□□□□ -1.09
APOC1-206ENST00000590334 TRBV25-1A0A075B6N4 114 aa8.23□□□□□ -1.09
APOC1-206ENST00000590334 IGHV1-24A0A0C4DH33 117 aa8.23□□□□□ -1.09
APOC1-206ENST00000590334 RAB5AP20339 215 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms