RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TPST1O60507 370 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 MT4P47944 62 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 B2MP61769 119 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 RPS28P62857 69 aaKnown RBP0.47□□□□□ -2.33
SMAD4-207ENST00000589076 PSPHP78330 225 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 FXYD3Q14802 87 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 SPINK13Q1W4C9 94 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 GLYATL3Q5SZD4 288 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 OR8I2Q8N0Y5 310 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 OTOSQ8NHW6 89 aa0.47□□□□□ -2.33
SMAD4-207ENST00000589076 SPAG17Q6Q759 2223 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 HIGD1CA8MV81 97 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 CDC42EP2O14613 210 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 DPM2O94777 84 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 SPINK7P58062 85 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 RHOHQ15669 191 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 IDO2Q6ZQW0 420 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 DMAC1Q96GE9 116 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 FAM103A1Q9BTL3 118 aaKnown RBP0.46□□□□□ -2.34
SMAD4-207ENST00000589076 MRPL36Q9P0J6 103 aaKnown RBP0.46□□□□□ -2.34
SMAD4-207ENST00000589076 AKAP9Q99996 3911 aa0.46□□□□□ -2.34
SMAD4-207ENST00000589076 TRAV36DV7A0A075B6V5 113 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 IGHV1-24A0A0C4DH33 117 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 A0A0G2JMM0 328 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 NBDYA0A0U1RRE5 68 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 A0A1B0GX51 115 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 PRH1P02810 166 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 SLC25A5P05141 298 aaKnown RBP0.45□□□□□ -2.34
SMAD4-207ENST00000589076 HIST1H1BP16401 226 aaKnown RBP0.45□□□□□ -2.34
SMAD4-207ENST00000589076 ADCYAP1P18509 176 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 PCBD1P61457 104 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 C5orf56Q8N8D9 126 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 OR4S1Q8NGB4 309 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 COMMD3Q9UBI1 195 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 METTL1Q9UBP6 276 aaKnown RBP0.45□□□□□ -2.34
SMAD4-207ENST00000589076 ARHGAP31Q2M1Z3 1444 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 NRKQ7Z2Y5 1582 aa0.45□□□□□ -2.34
SMAD4-207ENST00000589076 DNAH9Q9NYC9 4486 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 KIAA0586Q9BVV6 1533 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
SMAD4-207ENST00000589076 LY6G6CO95867 125 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 TCRAP04437 139 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 NBEAP1P0C6P0 100 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 ASIPP42127 132 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 OR8B8Q15620 311 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 HSD17B12Q53GQ0 312 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 LINC00208Q96KT6 92 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 SMR3AQ99954 134 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 SPANXA1Q9NS26 97 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 SPANXCQ9NY87 97 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 CC2D2AQ9P2K1 1620 aa0.44□□□□□ -2.34
SMAD4-207ENST00000589076 ZNF142P52746 1687 aaPredicted RBP0.43□□□□□ -2.34
SMAD4-207ENST00000589076 PKDREJQ9NTG1 2253 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 ANK3Q12955 4377 aaKnown RBP0.43□□□□□ -2.34
SMAD4-207ENST00000589076 LOC101927531A0A1B0GV80 90 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 IGKCP01834 107 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 IL7P13232 177 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 RPL37P61927 97 aaKnown RBP0.43□□□□□ -2.34
SMAD4-207ENST00000589076 PLGLB1Q02325 96 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 Q5XG85 94 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 UNQ5815/PRO19632Q6UWF5 114 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 MRPL40Q9NQ50 206 aaKnown RBP0.43□□□□□ -2.34
SMAD4-207ENST00000589076 TJP1Q07157 1748 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 MYOM1P52179 1685 aa0.43□□□□□ -2.34
SMAD4-207ENST00000589076 MYH13Q9UKX3 1938 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 FXYD1O00168 92 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 PAEPP09466 180 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 SPRR2DP22532 72 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 SDC4P31431 198 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 TAC4Q86UU9 113 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 MAGOHBQ96A72 148 aaKnown RBP0.42□□□□□ -2.34
SMAD4-207ENST00000589076 SLC35B3Q9H1N7 401 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 ATG5Q9H1Y0 275 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 CALML5Q9NZT1 146 aa0.42□□□□□ -2.34
SMAD4-207ENST00000589076 TANC1Q9C0D5 1861 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 AHCTF1Q8WYP5 2266 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 FAT2Q9NYQ8 4349 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 WIZO95785 1651 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 TRBV10-1A0A0K0K1A3 114 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 DEGS1O15121 323 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 SCTP09683 121 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 SPRR2EP22531 72 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 SPRR2BP35325 72 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 SPRR2AP35326 72 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 POLR2JP52435 117 aaKnown RBP0.41□□□□□ -2.34
SMAD4-207ENST00000589076 ZNF56Q15929 161 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 ABCA1O95477 2261 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 CHD1O14646 1710 aa0.41□□□□□ -2.34
SMAD4-207ENST00000589076 CASZ1Q86V15 1759 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 CDK5RAP2Q96SN8 1893 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 PLXNA1Q9UIW2 1896 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 TNCP24821 2201 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 BORCS7-ASMTA0A0B4J1R7 106 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 KLKP1Q107X0 134 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 IQCJQ1A5X6 159 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 CCDC153Q494R4 210 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 TMEM91Q6ZNR0 172 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 TCTE3Q8IZS6 198 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 TSKUQ8WUA8 353 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms