RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 C20orf203Q8NBC4 194 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 ZNRF2Q8NHG8 242 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 GTSF1LQ9H1H1 148 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 PRO1854Q9UHT4 67 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 AGRNO00468 2067 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 LRRK2Q5S007 2527 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 PTPN13Q12923 2485 aa13.8□□□□□ -0.2
DDX39A-206ENST00000587730 IGHV4-30-2A0A087WSY4 118 aa13.79□□□□□ -0.2
DDX39A-206ENST00000587730 ZNF688P0C7X2 276 aa13.79□□□□□ -0.2
DDX39A-206ENST00000587730 PSMB2P49721 201 aa13.79□□□□□ -0.2
DDX39A-206ENST00000587730 Q6ZS46 218 aa13.79□□□□□ -0.2
DDX39A-206ENST00000587730 Q8N1Y9 231 aa13.79□□□□□ -0.2
DDX39A-206ENST00000587730 SPTAN1Q13813 2472 aaKnown RBP13.78□□□□□ -0.2
DDX39A-206ENST00000587730 TMEM223A0PJW6 202 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 M0QXV9 152 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 CIDEAO60543 219 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 J3QLI3 93 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 DOPEY1Q5JWR5 2465 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 PIK3CD-AS1Q5SR53 167 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 AMELXQ99217 191 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 PYGO1Q9Y3Y4 419 aa13.78□□□□□ -0.2
DDX39A-206ENST00000587730 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-206ENST00000587730 SBSPONQ8IVN8 264 aa13.77□□□□□ -0.21
DDX39A-206ENST00000587730 PPDPFLQ8WWR9 84 aa13.77□□□□□ -0.21
DDX39A-206ENST00000587730 A0A0B4J2C4 111 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 CFC1BP0CG36 223 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 CFC1P0CG37 223 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 SMAGPQ0VAQ4 97 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 TEN1Q86WV5 123 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 MED13LQ71F56 2210 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 A0A1B0GV72 72 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 ELANEP08246 267 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 EMP1P54849 157 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 TSPEAR-AS2P59090 65 aa13.76□□□□□ -0.21
DDX39A-206ENST00000587730 MUC4Q99102 2169 aa13.75□□□□□ -0.21
DDX39A-206ENST00000587730 A8MWV9 139 aa13.75□□□□□ -0.21
DDX39A-206ENST00000587730 RHODO00212 210 aa13.75□□□□□ -0.21
DDX39A-206ENST00000587730 SMCPP49901 116 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-206ENST00000587730 TCTEX1D4Q5JR98 221 aa13.74□□□□□ -0.21
DDX39A-206ENST00000587730 PTH2Q96A98 100 aa13.74□□□□□ -0.21
DDX39A-206ENST00000587730 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
DDX39A-206ENST00000587730 ZNF22P17026 224 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-206ENST00000587730 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 TRAV2A0A0B4J234 112 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 SCGB1C2P0DMR2 95 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 P0DMU3 169 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 FAM231AP0DMU4 169 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 FAM231CP0DMU5 169 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 EDN2P20800 178 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 SPINK13Q1W4C9 94 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 LINC01356Q8N9X3 169 aa13.72□□□□□ -0.21
DDX39A-206ENST00000587730 IGLV4-3A0A075B6K6 122 aa13.71□□□□□ -0.21
DDX39A-206ENST00000587730 MTURNQ8N3F0 131 aa13.71□□□□□ -0.21
DDX39A-206ENST00000587730 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.21
DDX39A-206ENST00000587730 UBE2E2Q96LR5 201 aa13.71□□□□□ -0.21
DDX39A-206ENST00000587730 ABCA2Q9BZC7 2435 aa13.71□□□□□ -0.21
DDX39A-206ENST00000587730 TCL1BO95988 128 aa13.71□□□□□ -0.22
DDX39A-206ENST00000587730 IGHV4-59P01825 116 aa13.71□□□□□ -0.22
DDX39A-206ENST00000587730 ERG28Q9UKR5 140 aa13.71□□□□□ -0.22
DDX39A-206ENST00000587730 NBPF19A0A087WUL8 3843 aa13.7□□□□□ -0.22
DDX39A-206ENST00000587730 A8MTW9 85 aa13.7□□□□□ -0.22
DDX39A-206ENST00000587730 TMEM262E9PQX1 116 aa13.7□□□□□ -0.22
DDX39A-206ENST00000587730 DEFB112Q30KQ8 113 aa13.7□□□□□ -0.22
DDX39A-206ENST00000587730 Q5PR19 223 aa13.7□□□□□ -0.22
DDX39A-206ENST00000587730 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-206ENST00000587730 AVPP01185 164 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 IGKV3-20P01619 116 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 INSL3P51460 131 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 SYNJ2BPP57105 145 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 A4D1N5 150 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 M0R2P5 195 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
DDX39A-206ENST00000587730 SPANXA1Q9NS26 97 aa13.69□□□□□ -0.22
DDX39A-206ENST00000587730 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-206ENST00000587730 IGHV3-33P01772 117 aa13.68□□□□□ -0.22
DDX39A-206ENST00000587730 TMEM263Q8WUH6 116 aaKnown RBP13.68□□□□□ -0.22
DDX39A-206ENST00000587730 VPREB3Q9UKI3 123 aa13.68□□□□□ -0.22
DDX39A-206ENST00000587730 CD28P10747 220 aa13.67□□□□□ -0.22
DDX39A-206ENST00000587730 TNFRSF18Q9Y5U5 241 aa13.67□□□□□ -0.22
DDX39A-206ENST00000587730 CRYBG3Q68DQ2 2970 aa13.67□□□□□ -0.22
DDX39A-206ENST00000587730 HOXD3P31249 432 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-206ENST00000587730 LINC01600Q96MT4 127 aa13.67□□□□□ -0.22
DDX39A-206ENST00000587730 TIMM21Q9BVV7 248 aa13.67□□□□□ -0.22
DDX39A-206ENST00000587730 A0A0J9YXV3 536 aa13.66□□□□□ -0.22
DDX39A-206ENST00000587730 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
DDX39A-206ENST00000587730 RNF183Q96D59 192 aa13.66□□□□□ -0.22
DDX39A-206ENST00000587730 LINC00467Q9BRT7 94 aa13.66□□□□□ -0.22
DDX39A-206ENST00000587730 DNAJC30Q96LL9 226 aa13.65□□□□□ -0.22
DDX39A-206ENST00000587730 CDIP1Q9H305 208 aa13.65□□□□□ -0.22
DDX39A-206ENST00000587730 A0A0J9YXY3 114 aa13.64□□□□□ -0.23
DDX39A-206ENST00000587730 ATXN8Q156A1 80 aa13.64□□□□□ -0.23
DDX39A-206ENST00000587730 SFTA2Q6UW10 78 aa13.64□□□□□ -0.23
DDX39A-206ENST00000587730 OPRPNQ99935 248 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-206ENST00000587730 TINCRA0A1B0GVN0 87 aa13.64□□□□□ -0.23
DDX39A-206ENST00000587730 IGHV3-30-3P0DP02 117 aa13.64□□□□□ -0.23
DDX39A-206ENST00000587730 MUSTN1Q8IVN3 82 aa13.64□□□□□ -0.23
DDX39A-206ENST00000587730 IGHV1-58A0A0C4DH39 117 aa13.63□□□□□ -0.23
DDX39A-206ENST00000587730 SLC25A20O43772 301 aa13.63□□□□□ -0.23
DDX39A-206ENST00000587730 DEFB104AQ8WTQ1 72 aa13.63□□□□□ -0.23
DDX39A-206ENST00000587730 SPANXDQ9BXN6 97 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms