RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TP53TG1Q9Y2A0 90 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 GAGE12BA1L429 117 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 K7EQD1 137 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 RS1O15537 224 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 GAGE7O76087 117 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 GAGE12FP0CL80 117 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 GAGE12GP0CL81 117 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 GAGE12IP0CL82 117 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 IFI27P40305 119 aaPredicted RBP4.47□□□□□ -1.69
LIG3-206ENST00000586058 DAD1P61803 113 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 S100A12P80511 92 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 RPL36AP83881 106 aaKnown RBP4.47□□□□□ -1.69
LIG3-206ENST00000586058 SMAGPQ0VAQ4 97 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 LAGE3Q14657 143 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 RHOHQ15669 191 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 CFAP126Q5VTH2 177 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 OR10D4PQ8NGN7 298 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 RPL36ALQ969Q0 106 aaKnown RBP4.47□□□□□ -1.69
LIG3-206ENST00000586058 RNF183Q96D59 192 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 HIST1H2BLQ99880 126 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 PRADC1Q9BSG0 188 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 MAP1LC3CQ9BXW4 147 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 EDA2RQ9HAV5 297 aa4.47□□□□□ -1.69
LIG3-206ENST00000586058 IGHV3-73A0A0B4J1V6 119 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 IGHV1-24A0A0C4DH33 117 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 TRBV10-1A0A0K0K1A3 114 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 SDHAF1A6NFY7 115 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 VCYO14598 125 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 NUDT3O95989 172 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 CRYGDP07320 174 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
LIG3-206ENST00000586058 SPART-AS1P0CW21 52 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 KRTDAPP60985 99 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
LIG3-206ENST00000586058 Q6ZTI0 123 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 POM121L12Q8N7R1 296 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 RPL39LQ96EH5 51 aaKnown RBP4.46□□□□□ -1.7
LIG3-206ENST00000586058 SPATA25Q9BR10 227 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 OVOL2Q9BRP0 275 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 ZMAT4Q9H898 229 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 JPT2Q9H910 190 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
LIG3-206ENST00000586058 SETD2Q9BYW2 2564 aaPredicted RBP4.45□□□□□ -1.7
LIG3-206ENST00000586058 IGHV4-28A0A0C4DH34 117 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 TRBV6-5A0A0K0K1A5 114 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 I3L3M4 83 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 ATP5LO75964 103 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 SCGB1D1O95968 90 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 ATP5G1P05496 136 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 DEFB130BP0DP73 79 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 DEFB130AP0DP74 79 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 COTL1Q14019 142 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 TMEM97Q5BJF2 176 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 DEFB121Q5J5C9 76 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 FAM222AQ5U5X8 452 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 NRACQ8N912 160 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 TMEM70Q9BUB7 260 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 CYSLTR1Q9Y271 337 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 X6R8D5 127 aa4.45□□□□□ -1.7
LIG3-206ENST00000586058 TRBV6-4A0A1B0GX49 114 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 A4D1N5 150 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 H0Y8G0 127 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
LIG3-206ENST00000586058 M0QY20 66 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 PRM2P04554 102 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 GATA1P15976 413 aaPredicted RBP4.44□□□□□ -1.7
LIG3-206ENST00000586058 PMCHL1Q16048 86 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 Q6ZN92 141 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 ZNF479Q96JC4 524 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 C18orf15Q96N68 181 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 C11orf68Q9H3H3 251 aaKnown RBP4.44□□□□□ -1.7
LIG3-206ENST00000586058 ATRQ13535 2644 aa4.44□□□□□ -1.7
LIG3-206ENST00000586058 TRBV7-3A0A075B6L6 115 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 PLAC8L1A1L4L8 177 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 HSBP1L1C9JCN9 74 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 UBE2L6O14933 153 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 LINC00310P59036 64 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 DAZ4Q86SG3 579 aaKnown RBP4.43□□□□□ -1.7
LIG3-206ENST00000586058 Q8NAQ8 132 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 MRAPQ8TCY5 172 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 IFI27L1Q96BM0 104 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 C12orf57Q99622 126 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 DAZ3Q9NR90 486 aaKnown RBP4.43□□□□□ -1.7
LIG3-206ENST00000586058 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 PRO0255Q9UI72 69 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 CBY1Q9Y3M2 126 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 JMJD1CQ15652 2540 aa4.43□□□□□ -1.7
LIG3-206ENST00000586058 LINC01546A6NGU7 62 aa4.42□□□□□ -1.7
LIG3-206ENST00000586058 NUPR1O60356 82 aa4.42□□□□□ -1.7
LIG3-206ENST00000586058 PRSS1P07477 247 aa4.42□□□□□ -1.7
LIG3-206ENST00000586058 HTN3P15516 51 aa4.42□□□□□ -1.7
LIG3-206ENST00000586058 LINC00315P59091 139 aa4.42□□□□□ -1.7
LIG3-206ENST00000586058 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
LIG3-206ENST00000586058 KRTAP21-3Q3LHN1 58 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms