RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MRPL23Q16540 153 aaKnown RBP3.76□□□□□ -1.81
SF3B3-214ENST00000572365 Q56UQ5 140 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 NMSQ5H8A3 153 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 TTC32Q5I0X7 151 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 PVRIGQ6DKI7 326 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 H2BFWTQ7Z2G1 175 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 SAXO1Q8IYX7 474 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 OR13C6PQ8NH95 151 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 CACNG8Q8WXS5 425 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 C18orf15Q96N68 181 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 ZNF355PQ9NSJ1 428 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 HIGD1BQ9P298 99 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 TP53TG3Q9ULZ0 132 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
SF3B3-214ENST00000572365 IGHV3-43A0A0B4J1X8 118 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 IGHV3-35A0A0C4DH35 117 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 SYS1-DBNDD2H3BUS1 97 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 H3BUT2 72 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 J3QT63 122 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 IGHV3-43DP0DP04 118 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 HLA-DRB4P13762 266 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 CBLN1P23435 193 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 SRIP30626 198 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 DSCR10P59022 87 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 RPL8P62917 257 aaKnown RBP3.75□□□□□ -1.81
SF3B3-214ENST00000572365 SLC38A11Q08AI6 406 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 LCN12Q6JVE5 192 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 Q8N6K4 173 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.75□□□□□ -1.81
SF3B3-214ENST00000572365 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 FLYWCH2Q96CP2 140 aaKnown RBP3.75□□□□□ -1.81
SF3B3-214ENST00000572365 PBOV1Q9GZY1 135 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 HES4Q9HCC6 221 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 TMEM167BQ9NRX6 74 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 HLA-DRB4X5D2U9 266 aa3.75□□□□□ -1.81
SF3B3-214ENST00000572365 IGKV1-27A0A075B6S5 117 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 LOC102724200A0A096LPH7 203 aaPredicted RBP3.74□□□□□ -1.81
SF3B3-214ENST00000572365 IGHV7-81A0A0B4J1V7 117 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 IGHV1-24A0A0C4DH33 117 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 KBTBD11-OT1A0A1B0GTJ5 212 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 SMIM27A0A1W2PRY6 76 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 C2orf70A6NJV1 201 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 OOSP1A8MZH6 123 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 DHRS3O75911 302 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 OR7C1O76099 320 aaPredicted RBP3.74□□□□□ -1.81
SF3B3-214ENST00000572365 MOSP00540 346 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 CA1P00915 261 aaPredicted RBP3.74□□□□□ -1.81
SF3B3-214ENST00000572365 PPYP01298 95 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 SMR3BP02814 79 aaPredicted RBP3.74□□□□□ -1.81
SF3B3-214ENST00000572365 CXCL6P80162 114 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 NDPQ00604 133 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 EBI3Q14213 229 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 KISS1Q15726 138 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 C2orf66Q6UXQ4 117 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 FAM231DQ6ZW35 169 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 OR51H1Q8NH63 302 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 RAB37Q96AX2 223 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 SLC25A2Q9BXI2 301 aa3.74□□□□□ -1.81
SF3B3-214ENST00000572365 MRPL32Q9BYC8 188 aaKnown RBP3.74□□□□□ -1.81
SF3B3-214ENST00000572365 FABP5P3A8MUU1 101 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 M0QXV9 152 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 SNCGO76070 127 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
SF3B3-214ENST00000572365 APOMO95445 188 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 OR2H2O95918 312 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 TRGV3P03979 118 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 ATP5G1P05496 136 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 APELAP0DMC3 54 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 IFITM1P13164 125 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 ATP5G3P48201 142 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 FXYD4P59646 89 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
SF3B3-214ENST00000572365 ATP5G2Q06055 141 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 ZNF726P1Q15940 193 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 SP6Q3SY56 376 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 LINC01545Q5VT33 79 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 MORN3Q6PF18 240 aaPredicted RBP3.73□□□□□ -1.81
SF3B3-214ENST00000572365 Q6ZSR3 168 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 LINC00596Q86U02 117 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 IL1F10Q8WWZ1 152 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 COQ2Q96H96 371 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 DNAJC30Q96LL9 226 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 SPACA5Q96QH8 159 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 NDFIP1Q9BT67 221 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 IFI27L2Q9H2X8 130 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 SPANXB1Q9NS25 103 aaPredicted RBP3.73□□□□□ -1.81
SF3B3-214ENST00000572365 IDI2-AS1Q9NZ38 188 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 SS18L2Q9UHA2 77 aa3.73□□□□□ -1.81
SF3B3-214ENST00000572365 AMMECR1Q9Y4X0 333 aaPredicted RBP3.73□□□□□ -1.81
SF3B3-214ENST00000572365 TRBV20-1A0A075B6N2 111 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 IGKV3D-20A0A0C4DH25 116 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 A0A1B0GX51 115 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 FNDC10F2Z333 226 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 PDCD6O75340 191 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 OPRK1P41145 380 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 DEFB114Q30KQ6 69 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 LGALS9BQ3B8N2 356 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 IBA57Q5T440 356 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms