RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
NPLOC4-207ENST00000572346 VSIG2Q96IQ7 327 aa10.15□□□□□ -0.78
NPLOC4-207ENST00000572346 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
NPLOC4-207ENST00000572346 CARHSP1Q9Y2V2 147 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-207ENST00000572346 ICOSQ9Y6W8 199 aa10.15□□□□□ -0.78
NPLOC4-207ENST00000572346 A0A096LPF7 62 aa10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 APOC3P02656 99 aa10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 MRPL23Q16540 153 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
NPLOC4-207ENST00000572346 K7EQD1 137 aa10.13□□□□□ -0.79
NPLOC4-207ENST00000572346 EVI2AP22794 236 aa10.13□□□□□ -0.79
NPLOC4-207ENST00000572346 SRIP30626 198 aa10.13□□□□□ -0.79
NPLOC4-207ENST00000572346 LINC00315P59091 139 aa10.13□□□□□ -0.79
NPLOC4-207ENST00000572346 UFSP1Q6NVU6 142 aa10.13□□□□□ -0.79
NPLOC4-207ENST00000572346 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
NPLOC4-207ENST00000572346 RAB4BP61018 213 aa10.12□□□□□ -0.79
NPLOC4-207ENST00000572346 Q6ZRN7 208 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-207ENST00000572346 Q6ZSN1 163 aa10.12□□□□□ -0.79
NPLOC4-207ENST00000572346 CLRN3Q8NCR9 226 aa10.12□□□□□ -0.79
NPLOC4-207ENST00000572346 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
NPLOC4-207ENST00000572346 C7orf77A4D0Y5 90 aa10.11□□□□□ -0.79
NPLOC4-207ENST00000572346 SVBPQ8N300 66 aa10.11□□□□□ -0.79
NPLOC4-207ENST00000572346 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
NPLOC4-207ENST00000572346 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
NPLOC4-207ENST00000572346 H7C1H1 209 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 SIVA1O15304 175 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 SNAPINO95295 136 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 S100A8P05109 93 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 CAMPP49913 170 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 RHEBQ15382 184 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 KCNIP4Q6PIL6 250 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
NPLOC4-207ENST00000572346 A0A1B0GW15 77 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 GAGE1Q13065 139 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 GAGE4Q13068 117 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 GAGE5Q13069 117 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
NPLOC4-207ENST00000572346 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 S100PP25815 95 aa10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 RPL36AP83881 106 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 RPL36ALQ969Q0 106 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 IMMP2LQ96T52 175 aa10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
NPLOC4-207ENST00000572346 A0A087WWC5 75 aa10.07□□□□□ -0.8
NPLOC4-207ENST00000572346 HBBP68871 147 aa10.07□□□□□ -0.8
NPLOC4-207ENST00000572346 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
NPLOC4-207ENST00000572346 BTF3L4Q96K17 158 aa10.07□□□□□ -0.8
NPLOC4-207ENST00000572346 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
NPLOC4-207ENST00000572346 EPM2AB3EWF7 344 aa10.06□□□□□ -0.8
NPLOC4-207ENST00000572346 FUSP35637 526 aaKnown RBP eCLIP10.06□□□□□ -0.8
NPLOC4-207ENST00000572346 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-207ENST00000572346 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
NPLOC4-207ENST00000572346 TMEM242Q9NWH2 141 aa10.06□□□□□ -0.8
NPLOC4-207ENST00000572346 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
NPLOC4-207ENST00000572346 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
NPLOC4-207ENST00000572346 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
NPLOC4-207ENST00000572346 AMN1Q8IY45 258 aa10.05□□□□□ -0.8
NPLOC4-207ENST00000572346 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
NPLOC4-207ENST00000572346 Q9UF83 564 aa10.05□□□□□ -0.8
NPLOC4-207ENST00000572346 M0QY20 66 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 EREGO14944 169 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 XGP55808 180 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 LYPD5Q6UWN5 251 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 URGCP-MRPS24S4R325 110 aa10.04□□□□□ -0.8
NPLOC4-207ENST00000572346 TRAV9-1A0A075B6T8 112 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 RAB4AP20338 218 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 GATD1Q8NB37 220 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 FRZBQ92765 325 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
NPLOC4-207ENST00000572346 DNAH10OSP0CZ25 163 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 UBE2D3P61077 147 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 UBE2D2P62837 147 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 NFE4Q86UQ8 179 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 MRAP2Q96G30 205 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 RNF185Q96GF1 192 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 GTSF1LQ9H1H1 148 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 HERC1Q15751 4861 aa10.02□□□□□ -0.81
NPLOC4-207ENST00000572346 LINC00694P0DN24 101 aa10.01□□□□□ -0.81
NPLOC4-207ENST00000572346 OR10J3Q5JRS4 329 aa10.01□□□□□ -0.81
NPLOC4-207ENST00000572346 A0A087WTM6 91 aa10□□□□□ -0.81
NPLOC4-207ENST00000572346 TRAV8-6A0A0B4J262 113 aa10□□□□□ -0.81
NPLOC4-207ENST00000572346 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
NPLOC4-207ENST00000572346 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
NPLOC4-207ENST00000572346 CKS2P33552 79 aa10□□□□□ -0.81
NPLOC4-207ENST00000572346 TIRAPP58753 221 aa10□□□□□ -0.81
NPLOC4-207ENST00000572346 MRPL51Q4U2R6 128 aaKnown RBP10□□□□□ -0.81
NPLOC4-207ENST00000572346 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
NPLOC4-207ENST00000572346 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms