RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KLK9Q9UKQ9 250 aa15.34■□□□□ 0.05
MAP1LC3B-206ENST00000564844 U3KQE9 123 aa15.34■□□□□ 0.05
MAP1LC3B-206ENST00000564844 ABCA12Q86UK0 2595 aa15.33■□□□□ 0.05
MAP1LC3B-206ENST00000564844 CEMP1Q6PRD7 247 aaPredicted RBP15.33■□□□□ 0.05
MAP1LC3B-206ENST00000564844 A8MZ25 164 aa15.33■□□□□ 0.04
MAP1LC3B-206ENST00000564844 RHPN1-AS1Q9BWJ2 59 aa15.32■□□□□ 0.04
MAP1LC3B-206ENST00000564844 SMIM20Q8N5G0 67 aa15.32■□□□□ 0.04
MAP1LC3B-206ENST00000564844 C3orf56Q8N813 242 aa15.32■□□□□ 0.04
MAP1LC3B-206ENST00000564844 C5orf56Q8N8D9 126 aa15.32■□□□□ 0.04
MAP1LC3B-206ENST00000564844 MRPL53Q96EL3 112 aaKnown RBP15.32■□□□□ 0.04
MAP1LC3B-206ENST00000564844 VCYO14598 125 aa15.31■□□□□ 0.04
MAP1LC3B-206ENST00000564844 ADORA2A-AS1P86434 159 aa15.31■□□□□ 0.04
MAP1LC3B-206ENST00000564844 POLR2KP53803 58 aaKnown RBP15.31■□□□□ 0.04
MAP1LC3B-206ENST00000564844 AMELXQ99217 191 aa15.31■□□□□ 0.04
MAP1LC3B-206ENST00000564844 ABCA2Q9BZC7 2435 aa15.31■□□□□ 0.04
MAP1LC3B-206ENST00000564844 CCDC168Q8NDH2 2452 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 TRAV8-3A0A0A6YYJ7 113 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 OVOL1O14753 267 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 IGHV3-33P01772 117 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 UBE2E1P51965 193 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 KIF25-AS1Q9Y6Z4 181 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 JMJD1CQ15652 2540 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 OOSP1A8MZH6 123 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 SNCGO76070 127 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 Q8N1Y9 231 aa15.3■□□□□ 0.04
MAP1LC3B-206ENST00000564844 PRM2P04554 102 aa15.29■□□□□ 0.04
MAP1LC3B-206ENST00000564844 GAGE2BQ13066 116 aa15.29■□□□□ 0.04
MAP1LC3B-206ENST00000564844 GAGE2EQ4V326 116 aa15.29■□□□□ 0.04
MAP1LC3B-206ENST00000564844 GAGE2DQ9UEU5 116 aa15.29■□□□□ 0.04
MAP1LC3B-206ENST00000564844 NPFFO15130 113 aa15.29■□□□□ 0.04
MAP1LC3B-206ENST00000564844 BLCAPP62952 87 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 ZNF876PQ49A33 203 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 CCDC179H3BU77 68 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 P0DMU3 169 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 FAM231AP0DMU4 169 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 FAM231CP0DMU5 169 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 LY6DQ14210 128 aa15.28■□□□□ 0.04
MAP1LC3B-206ENST00000564844 LRRK2Q5S007 2527 aa15.27■□□□□ 0.04
MAP1LC3B-206ENST00000564844 NHLRC4P0CG21 123 aaPredicted RBP15.27■□□□□ 0.04
MAP1LC3B-206ENST00000564844 TTC32Q5I0X7 151 aa15.27■□□□□ 0.03
MAP1LC3B-206ENST00000564844 DAND5Q8N907 189 aa15.27■□□□□ 0.03
MAP1LC3B-206ENST00000564844 SOCS3O14543 225 aa15.26■□□□□ 0.03
MAP1LC3B-206ENST00000564844 A0A0U1RRA0 63 aa15.26■□□□□ 0.03
MAP1LC3B-206ENST00000564844 PAPPA-AS1Q5QFB9 102 aa15.26■□□□□ 0.03
MAP1LC3B-206ENST00000564844 C11orf71Q6IPW1 123 aa15.26■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TMEM263Q8WUH6 116 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-206ENST00000564844 ATP5J2P56134 94 aa15.25■□□□□ 0.03
MAP1LC3B-206ENST00000564844 FAM110AQ9BQ89 295 aa15.25■□□□□ 0.03
MAP1LC3B-206ENST00000564844 LENEPQ9Y5L5 61 aa15.25■□□□□ 0.03
MAP1LC3B-206ENST00000564844 GAGE5Q13069 117 aa15.25■□□□□ 0.03
MAP1LC3B-206ENST00000564844 GAGE6Q13070 117 aa15.25■□□□□ 0.03
MAP1LC3B-206ENST00000564844 CLEC2BQ92478 149 aa15.25■□□□□ 0.03
MAP1LC3B-206ENST00000564844 PROK1P58294 105 aa15.24■□□□□ 0.03
MAP1LC3B-206ENST00000564844 SPINK13Q1W4C9 94 aa15.24■□□□□ 0.03
MAP1LC3B-206ENST00000564844 EPG5Q9HCE0 2579 aa15.24■□□□□ 0.03
MAP1LC3B-206ENST00000564844 PPP1R17O96001 155 aa15.24■□□□□ 0.03
MAP1LC3B-206ENST00000564844 DUX5Q96PT3 197 aa15.24■□□□□ 0.03
MAP1LC3B-206ENST00000564844 KNCNA6PVL3 124 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 K7ENP7 123 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 LINC01620Q4KN68 170 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 VCX2Q9H322 139 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 Q9UF83 564 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 CFAP46Q8IYW2 2715 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 IGHV1-69DA0A0B4J2H0 117 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TRIAP1O43715 76 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 ZNF22P17026 224 aaPredicted RBP15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TMEM141Q96I45 108 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TMEM262E9PQX1 116 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 HIST2H2BDQ6DRA6 164 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 SBSPONQ8IVN8 264 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 C15orf53Q8NAA6 179 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 DUX3Q96PT4 197 aa15.23■□□□□ 0.03
MAP1LC3B-206ENST00000564844 PIEZO1Q92508 2521 aa15.22■□□□□ 0.03
MAP1LC3B-206ENST00000564844 NAV2Q8IVL1 2488 aa15.22■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TMEM223A0PJW6 202 aa15.22■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TIMM17AQ99595 171 aa15.22■□□□□ 0.03
MAP1LC3B-206ENST00000564844 TNFRSF18Q9Y5U5 241 aa15.22■□□□□ 0.03
MAP1LC3B-206ENST00000564844 ADAMTSL4-AS1Q5T5F5 129 aa15.21■□□□□ 0.03
MAP1LC3B-206ENST00000564844 FBN2P35556 2912 aa15.21■□□□□ 0.03
MAP1LC3B-206ENST00000564844 IGHV4OR15-8A0A075B7B6 117 aa15.21■□□□□ 0.03
MAP1LC3B-206ENST00000564844 A0A087WW49 117 aa15.21■□□□□ 0.03
MAP1LC3B-206ENST00000564844 RHODO00212 210 aa15.21■□□□□ 0.03
MAP1LC3B-206ENST00000564844 NDUFV3P56181 108 aaKnown RBP15.21■□□□□ 0.03
MAP1LC3B-206ENST00000564844 PKD1L2Q7Z442 2459 aa15.21■□□□□ 0.02
MAP1LC3B-206ENST00000564844 TRAV8-4A0A0B4J246 113 aa15.2■□□□□ 0.02
MAP1LC3B-206ENST00000564844 MOB4Q9Y3A3 225 aa15.2■□□□□ 0.02
MAP1LC3B-206ENST00000564844 A0A0J9YXY3 114 aa15.2■□□□□ 0.02
MAP1LC3B-206ENST00000564844 NDUFA4O00483 81 aa15.2■□□□□ 0.02
MAP1LC3B-206ENST00000564844 C10orf99Q6UWK7 81 aa15.2■□□□□ 0.02
MAP1LC3B-206ENST00000564844 C2orf82Q6UX34 121 aa15.2■□□□□ 0.02
MAP1LC3B-206ENST00000564844 H3BUX3 64 aa15.19■□□□□ 0.02
MAP1LC3B-206ENST00000564844 M0QY20 66 aa15.19■□□□□ 0.02
MAP1LC3B-206ENST00000564844 LEPROTO15243 131 aa15.19■□□□□ 0.02
MAP1LC3B-206ENST00000564844 IGHV3-30-3P0DP02 117 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 IGHV4-38-2P0DP08 117 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 NBL1P41271 181 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 LMO4P61968 165 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 RPL32P62910 135 aaKnown RBP15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 ATXN8Q156A1 80 aa15.18■□□□□ 0.02
MAP1LC3B-206ENST00000564844 TRBV27A0A0K0K1C4 114 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms