RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 C20orf203Q8NBC4 194 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 NDFIP1Q9BT67 221 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 WDR61Q9GZS3 305 aaKnown RBP4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 GFRA4Q9GZZ7 299 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 PSG8Q9UQ74 426 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 TRAV8-4A0A0B4J246 113 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 P01737 135 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 BTCP35070 178 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 CACNG7P62955 275 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 NHLH2Q02577 135 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 GAGE6Q13070 117 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 PYDC2Q56P42 97 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 FAM74A1Q5RGS3 127 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 OR5C1Q8NGR4 320 aa4.66□□□□□ -1.66
HERPUD1-206ENST00000563343 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 SERTM2A0A1B0GWG4 89 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 IFNA7P01567 189 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 TCRAP04437 139 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 ARMS2P0C7Q2 107 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 GZMBP10144 247 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 PVALBP20472 110 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 INO80EQ8NBZ0 244 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 OR11H4Q8NGC9 324 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 KCNIP2Q9NS61 270 aa4.65□□□□□ -1.67
HERPUD1-206ENST00000563343 IGLV4-60A0A075B6I1 120 aa4.64□□□□□ -1.67
HERPUD1-206ENST00000563343 RAB5CP51148 216 aa4.64□□□□□ -1.67
HERPUD1-206ENST00000563343 TAS2R45P59539 299 aa4.64□□□□□ -1.67
HERPUD1-206ENST00000563343 FLI1Q01543 452 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-206ENST00000563343 IQCJQ1A5X6 159 aa4.64□□□□□ -1.67
HERPUD1-206ENST00000563343 HIGD2BQ4VC39 106 aa4.64□□□□□ -1.67
HERPUD1-206ENST00000563343 GVQW2A0A096LPI5 108 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 TRBV6-1A0A0K0K1D8 114 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 NAP1L6A6NFF2 107 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 FABP5P3A8MUU1 101 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 FAM25EA8MYX2 175 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 B4DEV8 164 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 KRBOX1C9JBD0 128 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 M0R381 172 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 CRIP1P50238 77 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 RAB4BP61018 213 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 ZFP69Q49AA0 526 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 TMEM97Q5BJF2 176 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 PQLC2Q6ZP29 291 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 PRNTQ86SH4 94 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 C5orf17Q8NAS9 161 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 SUN5Q8TC36 379 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 LINC00474Q9P2X8 69 aa4.63□□□□□ -1.67
HERPUD1-206ENST00000563343 IGLV1-50A0A075B6I6 118 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 TRBV25-1A0A075B6N4 114 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 A0A1W2PNN7 141 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 GRIFINA4D1Z8 144 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 C17orf112F2Z3M2 114 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 SCGB1D1O95968 90 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 SAPCD1Q5SSQ6 148 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 DERL1Q9BUN8 251 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 PHLDA3Q9Y5J5 127 aa4.62□□□□□ -1.67
HERPUD1-206ENST00000563343 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
HERPUD1-206ENST00000563343 H0Y9J4 135 aa4.61□□□□□ -1.67
HERPUD1-206ENST00000563343 M0R036 132 aa4.61□□□□□ -1.67
HERPUD1-206ENST00000563343 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
HERPUD1-206ENST00000563343 ZFP82Q8N141 532 aa4.61□□□□□ -1.67
HERPUD1-206ENST00000563343 TRAV34A0A0B4J273 112 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 IGHV1-24A0A0C4DH33 117 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 CENPXA8MT69 81 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 K7EQM0 130 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 HMGB3O15347 200 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 ARL14EPLP0DKL9 152 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 TPT1P13693 172 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 PTTG1IPP53801 180 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 ZNF56Q15929 161 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 COX8CQ7Z4L0 72 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 FER1L6-AS1Q8NA97 138 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 DIRC1Q969H9 104 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 AQP10Q96PS8 301 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 SDHCQ99643 169 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 SEC22CQ9BRL7 303 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 EPDR1Q9UM22 224 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 ARL2-SNX15V9GYD0 113 aa4.6□□□□□ -1.67
HERPUD1-206ENST00000563343 H0YIZ8 118 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 SH2D1AO60880 128 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 IGLV7-43P04211 117 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 RAB2AP61019 212 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 IFITM3Q01628 133 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 C1orf137Q5JT78 98 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 TCTE3Q8IZS6 198 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 ENKURQ8TC29 256 aa4.59□□□□□ -1.67
HERPUD1-206ENST00000563343 TRAV6A0A075B6T7 132 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 MT-ND6P03923 174 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 STAG3L2P0CL84 134 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 STAG3L3P0CL85 134 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 IL7P13232 177 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 AMTP48728 403 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 TRIQKQ629K1 86 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 Q86TA4 180 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms