RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TIMM17AQ99595 171 aa15.61■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 PRSS29PA6NIE9 313 aa15.6■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 NSUN5P1Q3KNT7 163 aa15.6■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 IGIPA6NJ69 53 aa15.59■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 I3L3M4 83 aa15.59■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 MYO9AB2RTY4 2548 aa15.59■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 PAPPA-AS1Q5QFB9 102 aa15.59■□□□□ 0.09
VPS9D1-AS1-202ENST00000562866 A6NDN8 102 aa15.58■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 TAX1BP3O14907 124 aa15.58■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 TLN2Q9Y4G6 2542 aa15.58■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 CCDC168Q8NDH2 2452 aa15.57■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 RHODO00212 210 aa15.57■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 PMVKQ15126 192 aa15.57■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 C11orf72Q8NBR9 251 aa15.57■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 SAP30O75446 220 aa15.57■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 PROK1P58294 105 aa15.56■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 UFSP1Q6NVU6 142 aa15.56■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 ZNF469Q96JG9 3925 aaPredicted RBP15.55■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 TSHBP01222 138 aa15.55■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 XCL2Q9UBD3 114 aa15.55■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 SONP18583 2426 aaKnown RBP15.55■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 NPSP0C0P6 89 aa15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 RPL39P62891 51 aaKnown RBP15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 BEAN1Q3B7T3 259 aa15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 FAM110AQ9BQ89 295 aa15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 Q6ZVH6 145 aa15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 OR11H2Q8NH07 326 aa15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 CST9LQ9H4G1 147 aa15.54■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 SORL1Q92673 2214 aa15.53■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 TRBV25-1A0A075B6N4 114 aa15.53■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 CFAP126Q5VTH2 177 aa15.53■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 CHAC1Q9BUX1 264 aa15.53■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 TNFRSF18Q9Y5U5 241 aa15.53■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 TRAV8-6A0A0B4J262 113 aa15.52■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 ADARB2-AS1A8MUL3 147 aa15.52■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 IGLV1-51P01701 117 aa15.52■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 PRM2P04554 102 aa15.52■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 C20orf203Q8NBC4 194 aa15.52■□□□□ 0.08
VPS9D1-AS1-202ENST00000562866 IGHV3-73A0A0B4J1V6 119 aa15.52■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 E9PLD3 99 aa15.52■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 TTTY13Q9BZ97 58 aa15.52■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 RS1O15537 224 aa15.51■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 LY6G6DO95868 133 aa15.51■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 DEFB104AQ8WTQ1 72 aa15.51■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 DNAJC30Q96LL9 226 aa15.51■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 SMR3AQ99954 134 aa15.51■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 HERVK_113P61574 105 aa15.5■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 UBE2V1Q13404 147 aa15.5■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 C1orf158Q8N1D5 194 aa15.5■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 H3BRM9 83 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 P0DMU3 169 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 FAM231AP0DMU4 169 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 FAM231CP0DMU5 169 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 VAMP3Q15836 100 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 NDUFA11Q86Y39 141 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 MAPKAPK5-AS1Q8N8E1 139 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 MRPL16Q9NX20 251 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 IGLV4-69A0A075B6H9 119 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 TAL2Q16559 108 aa15.49■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 IGHV3-53P01767 116 aa15.48■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 PTTG1IPP53801 180 aa15.48■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 UNC79Q9P2D8 2635 aa15.47■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 MYMXA0A1B0GTQ4 84 aa15.47■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 IGHV3OR16-12A0A075B7B8 117 aa15.47■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 C11orf86A6NJI1 115 aa15.47■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 IL17DQ8TAD2 202 aa15.47■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 PRADC1Q9BSG0 188 aa15.47■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 AZU1P20160 251 aa15.46■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 GCSHP23434 173 aa15.46■□□□□ 0.07
VPS9D1-AS1-202ENST00000562866 ANK3Q12955 4377 aaKnown RBP15.45■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 TMEM263Q8WUH6 116 aaKnown RBP15.45■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 PYGO1Q9Y3Y4 419 aa15.45■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 AKAP9Q99996 3911 aa15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 Q6ZSN1 163 aa15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 RNASE8Q8TDE3 154 aaKnown RBP15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 TM2D2Q9BX73 214 aa15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 NFE4Q86UQ8 179 aa15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 CEND1Q8N111 149 aa15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 C1QTNF4Q9BXJ3 329 aa15.44■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 HECTD1Q9ULT8 2610 aa15.43■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 C9orf118A6NHY6 69 aa15.43■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 CCL25O15444 150 aa15.43■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 SMIM13P0DJ93 91 aa15.42■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 CRYBA4P53673 196 aa15.42■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 OR4C5Q8NGB2 326 aa15.42■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 VCX2Q9H322 139 aa15.42■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 C19orf73Q9NVV2 129 aa15.42■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 TRGV1A0A0A0MS02 117 aa15.41■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 PF4P02776 101 aa15.41■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 ITPR2Q14571 2701 aa15.41■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 IGLV4-3A0A075B6K6 122 aa15.41■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 EMP1P54849 157 aa15.41■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 TMEM170BQ5T4T1 132 aa15.41■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 ACANP16112 2415 aa15.4■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 ZNF815PA8K554 130 aa15.4■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 FXYD2P54710 66 aa15.4■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 HIST1H4GQ99525 98 aa15.4■□□□□ 0.06
VPS9D1-AS1-202ENST00000562866 AMMECR1LQ6DCA0 310 aa15.39■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 ZNRF2Q8NHG8 242 aa15.39■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 C16orf74Q96GX8 76 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms