RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 SMIM12Q96EX1 92 aa2.77□□□□□ -1.97
TRAV15-201ENST00000556680 BTF3L4Q96K17 158 aa2.77□□□□□ -1.97
TRAV15-201ENST00000556680 FAM210BQ96KR6 192 aa2.77□□□□□ -1.97
TRAV15-201ENST00000556680 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
TRAV15-201ENST00000556680 ZMAT5Q9UDW3 170 aaKnown RBP2.77□□□□□ -1.97
TRAV15-201ENST00000556680 ZFP30Q9Y2G7 519 aa2.77□□□□□ -1.97
TRAV15-201ENST00000556680 V9GYV3 84 aa2.77□□□□□ -1.97
TRAV15-201ENST00000556680 CUBNO60494 3623 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 OTOGQ6ZRI0 2925 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 SORL1Q92673 2214 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 MUC4Q99102 2169 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 TRBV6-1A0A0K0K1D8 114 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 GRIFINA4D1Z8 144 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 KNCNA6PVL3 124 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 COLCA2A8K830 154 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 FABP5P3A8MUU1 101 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 A8MWL6 223 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 RAB5AP20339 215 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 S100A4P26447 101 aaKnown RBP2.76□□□□□ -1.97
TRAV15-201ENST00000556680 RNASE4P34096 147 aaKnown RBP2.76□□□□□ -1.97
TRAV15-201ENST00000556680 RPS20P60866 119 aaKnown RBP2.76□□□□□ -1.97
TRAV15-201ENST00000556680 DEFB114Q30KQ6 69 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 ACTL10Q5JWF8 245 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 LINC00322Q6ZN03 302 aaPredicted RBP2.76□□□□□ -1.97
TRAV15-201ENST00000556680 FAM231DQ6ZW35 169 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 C3orf56Q8N813 242 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 OR8A1Q8NGG7 326 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 TMEM158Q8WZ71 300 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 RNF185Q96GF1 192 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 LINC00477Q96M19 166 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 AGPAT4-IT1Q9H0P7 198 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 TUBA4BQ9H853 241 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 KLF12Q9Y4X4 402 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
TRAV15-201ENST00000556680 SETXQ7Z333 2677 aaKnown RBP2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TRAV12-2A0A075B6T6 113 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TRAV12-3A0A0B4J271 114 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TRAV25A0A0B4J276 109 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TRAV21A0A0B4J279 112 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 MUC21A0A0G2JKD1 596 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 A0A0J9YX75 114 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 MUC21A0A140T8X8 626 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 C19orf71A6NCJ1 209 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 HIGD1CA8MV81 97 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 OR11H12B2RN74 326 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TRGC2P03986 189 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 PFN1P07737 140 aaKnown RBP2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TSPOP30536 169 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 CDKN1BP46527 198 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 ZNF80P51504 273 aaPredicted RBP2.75□□□□□ -1.97
TRAV15-201ENST00000556680 NDUFA6P56556 154 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 FABP9Q0Z7S8 132 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 SPINK13Q1W4C9 94 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 GDF5OSQ5U4N7 250 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 FOXI2Q6ZQN5 318 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 APRG1Q8IVJ8 170 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 DCANP1Q8TF63 244 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TSKUQ8WUA8 353 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 IMMP2LQ96T52 175 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 SAV1Q9H4B6 383 aaPredicted RBP2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TMEM242Q9NWH2 141 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 NAT8BQ9UHF3 227 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 GOLT1BQ9Y3E0 138 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 TRAPPC1Q9Y5R8 145 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 NF1P21359 2839 aa2.75□□□□□ -1.97
TRAV15-201ENST00000556680 ANK3Q12955 4377 aaKnown RBP2.75□□□□□ -1.97
TRAV15-201ENST00000556680 NSD1Q96L73 2696 aaPredicted RBP2.75□□□□□ -1.97
TRAV15-201ENST00000556680 HIVEP1P15822 2718 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 TRBV24-1A0A075B6N3 115 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 TRAV9-1A0A075B6T8 112 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 TRAV2A0A0B4J234 112 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 SMIM27A0A1W2PRY6 76 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 C7orf71A4D174 169 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 H3BVH4 76 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 M0R2Z0 102 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 S100A8P05109 93 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 ARMS2P0C7Q2 107 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 HTN1P15515 57 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 ASIPP42127 132 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 CRIP1P50238 77 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
TRAV15-201ENST00000556680 NUTF2P61970 127 aaKnown RBP2.74□□□□□ -1.97
TRAV15-201ENST00000556680 HBBP68871 147 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 COX19Q49B96 90 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 PRR9Q5T870 116 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 SPANXN1Q5VSR9 72 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 LYZL1Q6UWQ5 148 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 LINC00173Q6ZV60 143 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 SMIM15Q7Z3B0 74 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 FER1L6-AS1Q8NA97 138 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 NUP35Q8NFH5 326 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 OR2K2Q8NGT1 345 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 TMEM208Q9BTX3 173 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 WFDC10AQ9H1F0 79 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 LENEPQ9Y5L5 61 aa2.74□□□□□ -1.97
TRAV15-201ENST00000556680 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
TRAV15-201ENST00000556680 F8P00451 2351 aa2.73□□□□□ -1.97
TRAV15-201ENST00000556680 A0A1B0GUT8 65 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms