RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SRIP30626 198 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 CFAP126Q5VTH2 177 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 TP53TG1Q9Y2A0 90 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 F5H697 171 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 DEFB130BP0DP73 79 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 DEFB130AP0DP74 79 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 LGALS9BQ3B8N2 356 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 FAM222AQ5U5X8 452 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 PTH2Q96A98 100 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 PAM16Q9Y3D7 125 aa7.28□□□□□ -1.24
SRP54-208ENST00000555557 TRGV2A0A075B6R0 118 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 A8MWV9 139 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 CKS2P33552 79 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 ZNF479Q96JC4 524 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 ALKBH7Q9BT30 221 aaPredicted RBP7.27□□□□□ -1.25
SRP54-208ENST00000555557 UQCR10Q9UDW1 63 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 CELA1Q9UNI1 258 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 DNAH9Q9NYC9 4486 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 CCL25O15444 150 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 RS1O15537 224 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 NUPR1O60356 82 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 ZNF56Q15929 161 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 PIK3CD-AS1Q5SR53 167 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 UFSP1Q6NVU6 142 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 OR4C5Q8NGB2 326 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 TM2D3Q9BRN9 247 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 DKK2Q9UBU2 259 aa7.27□□□□□ -1.25
SRP54-208ENST00000555557 PPBPP02775 128 aa7.26□□□□□ -1.25
SRP54-208ENST00000555557 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
SRP54-208ENST00000555557 Q6ZSN1 163 aa7.26□□□□□ -1.25
SRP54-208ENST00000555557 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
SRP54-208ENST00000555557 SPATA25Q9BR10 227 aa7.26□□□□□ -1.25
SRP54-208ENST00000555557 RPL39LQ96EH5 51 aaKnown RBP7.25□□□□□ -1.25
SRP54-208ENST00000555557 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 U3KQK5 164 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 TRAV4A0A0B4J268 109 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 NPYP01303 97 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 HNRNPA3P51991 378 aaKnown RBP7.25□□□□□ -1.25
SRP54-208ENST00000555557 STPG4Q8N801 248 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 Q9UF83 564 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
SRP54-208ENST00000555557 A0A0J9YWU9 116 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 LYRM9A8MSI8 78 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 P0DMU3 169 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 FAM231AP0DMU4 169 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 FAM231CP0DMU5 169 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 Q0VG73 95 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 SPATA45Q537H7 98 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 LINC00612Q8N6U2 182 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 C18orf32Q8TCD1 76 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 MRAP2Q96G30 205 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 CHTOPQ9Y3Y2 248 aaKnown RBP7.24□□□□□ -1.25
SRP54-208ENST00000555557 COX11Q9Y6N1 276 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 NACAE9PAV3 2078 aa7.24□□□□□ -1.25
SRP54-208ENST00000555557 LOC389332A0A1B0GUA5 103 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 M0QY20 66 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 TNFRSF6BO95407 300 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 SPART-AS1P0CW21 52 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 Q6ZN92 141 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 NRACQ8N912 160 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 MRPS16Q9Y3D3 137 aaKnown RBP7.23□□□□□ -1.25
SRP54-208ENST00000555557 RHODO00212 210 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 SERF1AO75920 110 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 DAD1P61803 113 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 RNF151Q2KHN1 245 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 ZFP2Q6ZN57 461 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 ZMAT4Q9H898 229 aa7.23□□□□□ -1.25
SRP54-208ENST00000555557 DEFB104AQ8WTQ1 72 aa7.22□□□□□ -1.25
SRP54-208ENST00000555557 TRGV4A0A0C4DH28 118 aa7.21□□□□□ -1.25
SRP54-208ENST00000555557 KRTDAPP60985 99 aa7.21□□□□□ -1.25
SRP54-208ENST00000555557 FHL2Q14192 279 aa7.21□□□□□ -1.25
SRP54-208ENST00000555557 OR10J3Q5JRS4 329 aa7.21□□□□□ -1.25
SRP54-208ENST00000555557 SLC25A29Q8N8R3 303 aa7.21□□□□□ -1.25
SRP54-208ENST00000555557 CIDEAO60543 219 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.26
SRP54-208ENST00000555557 LINC00310P59036 64 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 C12orf74Q32Q52 190 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 Q8N976 141 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 URB1-AS1Q96HZ7 61 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 C18orf15Q96N68 181 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 VPS25Q9BRG1 176 aa7.21□□□□□ -1.26
SRP54-208ENST00000555557 C11orf68Q9H3H3 251 aaKnown RBP7.21□□□□□ -1.26
SRP54-208ENST00000555557 TGP01266 2768 aa7.2□□□□□ -1.26
SRP54-208ENST00000555557 HTN3P15516 51 aa7.2□□□□□ -1.26
SRP54-208ENST00000555557 NEGR1Q7Z3B1 354 aa7.2□□□□□ -1.26
SRP54-208ENST00000555557 NIT1Q86X76 327 aa7.2□□□□□ -1.26
SRP54-208ENST00000555557 LOC100131303A0A0U1RQF7 123 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
SRP54-208ENST00000555557 SUMO2P61956 95 aaKnown RBP7.19□□□□□ -1.26
SRP54-208ENST00000555557 NEXN-AS1Q8NBZ9 246 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 MAP1LC3AQ9H492 121 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 HSBP1L1C9JCN9 74 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 H7C1H1 209 aa7.19□□□□□ -1.26
SRP54-208ENST00000555557 K7EQD1 137 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms