RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CYP4F30PQ9H0H9 118 aa2.05□□□□□ -2.08
KTN1-220ENST00000555172 SMCO4Q9NRQ5 59 aa2.05□□□□□ -2.08
KTN1-220ENST00000555172 PCDH15Q96QU1 1955 aa2.05□□□□□ -2.08
KTN1-220ENST00000555172 EPRSP07814 1512 aaKnown RBP2.05□□□□□ -2.08
KTN1-220ENST00000555172 LAMC3Q9Y6N6 1575 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 CR1P17927 2039 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 IGKV2-28A0A075B6P5 120 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 TRAV22A0A0B4J277 110 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 CLPSL1A2RUU4 121 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 NUPR2A6NF83 97 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 IGKV2D-28P01615 120 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 UBE2D1P51668 147 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 NMSQ5H8A3 153 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 ST20Q9HBF5 79 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 COL4A5P29400 1685 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 FN1P02751 2386 aaKnown RBP2.04□□□□□ -2.08
KTN1-220ENST00000555172 PLIN4Q96Q06 1357 aa2.04□□□□□ -2.08
KTN1-220ENST00000555172 H3BRM9 83 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 CHKB-CPT1BH3BT56 60 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 PPYP01298 95 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 CYP2G1PQ6ZSU1 146 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 FAM223AQ8IWN6 122 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 TRGV9Q99603 122 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 SHANK2Q9UPX8 1470 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 PSME4Q14997 1843 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 ADAMTS7Q9UKP4 1686 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 COL1A2P08123 1366 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 TRBV7-3A0A075B6L6 115 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 TRBV7-1A0A0A6YYK4 115 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 A0A0J9YY99 117 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 A0A1W2PPM0 123 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 C10orf142B7Z368 130 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 H7BZZ5 65 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 IGLV3-1P01715 115 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 Q5VV11 94 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 WFDC10AQ9H1F0 79 aa2.03□□□□□ -2.08
KTN1-220ENST00000555172 ALPK2Q86TB3 2170 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 TOPAZ1Q8N9V7 1692 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 LRRIQ1Q96JM4 1722 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 TNS1Q9HBL0 1735 aaKnown RBP2.02□□□□□ -2.09
KTN1-220ENST00000555172 LAMB2P55268 1798 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 IGLC2P0DOY2 106 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 IGLC3P0DOY3 106 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 KRTAP12-2P59991 146 aa2.02□□□□□ -2.09
KTN1-220ENST00000555172 TRAV23DV6A0A075B6W5 121 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 BVES-AS1Q5T3Y7 98 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 C20orf197Q8N268 126 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 Q8N6K4 173 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 DMAC1Q96GE9 116 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 TCHHQ07283 1943 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 CHD1O14646 1710 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 LAMB1P07942 1786 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 RGPD4Q7Z3J3 1758 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 COL16A1Q07092 1604 aaPredicted RBP2.01□□□□□ -2.09
KTN1-220ENST00000555172 DLG5Q8TDM6 1919 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 TRBV6-4A0A1B0GX49 114 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 H3BRN7 92 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 H3BUT2 72 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 DNAL4O96015 105 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 RNASE3P12724 160 aaKnown RBP2.01□□□□□ -2.09
KTN1-220ENST00000555172 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 PRR9Q5T870 116 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 TTTY12Q9BZ98 90 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 SPAG17Q6Q759 2223 aa2.01□□□□□ -2.09
KTN1-220ENST00000555172 EDC4Q6P2E9 1401 aaKnown RBP2□□□□□ -2.09
KTN1-220ENST00000555172 CCDC141Q6ZP82 1450 aa2□□□□□ -2.09
KTN1-220ENST00000555172 DOCK2Q92608 1830 aa2□□□□□ -2.09
KTN1-220ENST00000555172 TANC1Q9C0D5 1861 aa2□□□□□ -2.09
KTN1-220ENST00000555172 DIP2BQ9P265 1576 aa2□□□□□ -2.09
KTN1-220ENST00000555172 CFDP00746 253 aaPredicted RBP2□□□□□ -2.09
KTN1-220ENST00000555172 IL9P15248 144 aa2□□□□□ -2.09
KTN1-220ENST00000555172 EDDM3BP56851 147 aa2□□□□□ -2.09
KTN1-220ENST00000555172 PMCHL1Q16048 86 aa2□□□□□ -2.09
KTN1-220ENST00000555172 PRO1854Q9UHT4 67 aa2□□□□□ -2.09
KTN1-220ENST00000555172 RABAC1Q9UI14 185 aa2□□□□□ -2.09
KTN1-220ENST00000555172 SHROOM2Q13796 1616 aa2□□□□□ -2.09
KTN1-220ENST00000555172 EXPH5Q8NEV8 1989 aa2□□□□□ -2.09
KTN1-220ENST00000555172 CDK13Q14004 1512 aaKnown RBP2□□□□□ -2.09
KTN1-220ENST00000555172 NDUFC1O43677 76 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 UBE2D3P61077 147 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 UBE2D2P62837 147 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 ZNF818PQ6ZRF7 136 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 PRO0461Q9UI25 63 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 CLIP1P30622 1438 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 CCDC88BA6NC98 1476 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 NLRP1Q9C000 1473 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 SHROOM3Q8TF72 1996 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 RGPD3A6NKT7 1758 aaPredicted RBP1.99□□□□□ -2.09
KTN1-220ENST00000555172 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 JMJD7-PLA2G4BH0Y9G9 81 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 PDE6GP18545 87 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 EFNA4P52798 201 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 NDUFA11Q86Y39 141 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 C4orf3Q8WVX3 66 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 FAM167A-AS1Q96KT0 104 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 PI4KAP42356 2102 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 MED12Q93074 2177 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms