RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GFRA4Q9GZZ7 299 aa4.43□□□□□ -1.7
PRKDC-211ENST00000546304 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
PRKDC-211ENST00000546304 IGHV3-73A0A0B4J1V6 119 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 A0A0J9YY99 117 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 PPP1R2P9O14990 202 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 CIDEAO60543 219 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 MT-ND4LP03901 98 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 TRGC1P0CF51 173 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-211ENST00000546304 SSTP61278 116 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 NDUFA5Q16718 116 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 C10orf91Q5T1B1 145 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 ZFP2Q6ZN57 461 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 C15orf53Q8NAA6 179 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 BORCS7Q96B45 105 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 PGLYRP4Q96LB8 373 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 SAMD10Q9BYL1 202 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 JPT2Q9H910 190 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 NAT8BQ9UHF3 227 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 PRO0255Q9UI72 69 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
PRKDC-211ENST00000546304 A0A1B0GUT8 65 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 SMIM27A0A1W2PRY6 76 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 H3BNG1 76 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 K7EQD1 137 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 SMIM17P0DL12 118 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 CRYBA4P53673 196 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 FOXA3P55318 350 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-211ENST00000546304 TCTAP57738 103 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 SLAQ13239 276 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 RHEBQ15382 184 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 RHOHQ15669 191 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 TWIST1Q15672 202 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 ZNF56Q15929 161 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-211ENST00000546304 NUP35Q8NFH5 326 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 VSIG2Q96IQ7 327 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 MSRB1Q9NZV6 116 aa4.41□□□□□ -1.7
PRKDC-211ENST00000546304 TRBV6-4A0A1B0GX49 114 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 APOC3P02656 99 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 CRYGDP07320 174 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 MGPP08493 103 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 NTF3P20783 257 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 EVI2AP22794 236 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 SVBPQ8N300 66 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 SLC25A29Q8N8R3 303 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 PRADC1Q9BSG0 188 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 DPH3P1Q9H4G8 78 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 APLNQ9ULZ1 77 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 HHLA3Q9XRX5 114 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 ICOSQ9Y6W8 199 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 KIF25-AS1Q9Y6Z4 181 aa4.4□□□□□ -1.71
PRKDC-211ENST00000546304 DNAH10Q8IVF4 4471 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 A0A096LPF7 62 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 LOC100131303A0A0U1RQF7 123 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 SRIP30626 198 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 RAB4BP61018 213 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 HBBP68871 147 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 RIGQ13278 110 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
PRKDC-211ENST00000546304 SMIM15Q7Z3B0 74 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 SLC7A5P1Q8MH63 180 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
PRKDC-211ENST00000546304 FRAS1Q86XX4 4008 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 A0A087WWC5 75 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 TRBV10-1A0A0K0K1A3 114 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 A0A1B0GW15 77 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 A0A1B0GXF2 115 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 C7orf77A4D0Y5 90 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 H7C1H1 209 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 SNAPINO95295 136 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 P0DMU3 169 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 LINC00694P0DN24 101 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 LINC00315P59091 139 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
PRKDC-211ENST00000546304 KCNIP4Q6PIL6 250 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 ATP5L2Q7Z4Y8 100 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 IMMP2LQ96T52 175 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 TMEM191AQ9H0A3 160 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 RPS10P5Q9NQ39 176 aa4.38□□□□□ -1.71
PRKDC-211ENST00000546304 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 LCE6AA0A183 80 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 GAGE12JA6NER3 117 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 S100A8P05109 93 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 NPSP0C0P6 89 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 S100PP25815 95 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 CAMPP49913 170 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 FAM3BP58499 235 aaPredicted RBP4.37□□□□□ -1.71
PRKDC-211ENST00000546304 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
PRKDC-211ENST00000546304 GAGE1Q13065 139 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 GAGE4Q13068 117 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 GAGE5Q13069 117 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 NEGR1Q7Z3B1 354 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 UBE2DNLQ8IWF7 75 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 AMN1Q8IY45 258 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms