RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 Q6ZUT4 128 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 TMEM219Q86XT9 240 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 C10orf105Q8TEF2 133 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 SPEGQ15772 3267 aa4.79□□□□□ -1.64
SNHG1-225ENST00000545920 RP1L1Q8IWN7 2480 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-225ENST00000545920 FAM240AA0A1B0GVK7 77 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 A0A1W2PPR1 153 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 B4DSR2 109 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 SLC25A20O43772 301 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 IGHV4-39P01824 125 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 MSMBP08118 114 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 SPINK8P0C7L1 97 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-225ENST00000545920 CDSNQ15517 529 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 ZNF56Q15929 161 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 KLHL30-AS1Q8NEE0 82 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 ZNRF2Q8NHG8 242 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 TMEM263Q8WUH6 116 aaKnown RBP4.78□□□□□ -1.64
SNHG1-225ENST00000545920 SPXQ9BT56 116 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 PRORYQ9H606 182 aa4.78□□□□□ -1.64
SNHG1-225ENST00000545920 EP300Q09472 2414 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-225ENST00000545920 CNOT1A5YKK6 2376 aaKnown RBP4.78□□□□□ -1.64
SNHG1-225ENST00000545920 EYSQ5T1H1 3165 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 KMT2BQ9UMN6 2715 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-225ENST00000545920 APC2O95996 2303 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 ACACAQ13085 2346 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 MYO15AQ9UKN7 3530 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 MAP1BP46821 2468 aaKnown RBP4.77□□□□□ -1.65
SNHG1-225ENST00000545920 IGLV4-3A0A075B6K6 122 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 TRBV10-2A0A0K0K1G8 114 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 A4D1N5 150 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 H3BUX3 64 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 TRBV12-3P01733 135 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 SRD5A1P18405 259 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 ZFAND6Q6FIF0 208 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 Q6ZQT7 251 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 ANKRD29Q8N6D5 301 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 WWC2-AS2Q96NR7 200 aa4.77□□□□□ -1.65
SNHG1-225ENST00000545920 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
SNHG1-225ENST00000545920 TSPEAR-AS2P59090 65 aa4.76□□□□□ -1.65
SNHG1-225ENST00000545920 RPL39P62891 51 aaKnown RBP4.76□□□□□ -1.65
SNHG1-225ENST00000545920 ZNF415Q09FC8 603 aa4.76□□□□□ -1.65
SNHG1-225ENST00000545920 LINC01620Q4KN68 170 aa4.76□□□□□ -1.65
SNHG1-225ENST00000545920 TEX29Q8N6K0 151 aa4.76□□□□□ -1.65
SNHG1-225ENST00000545920 CARD19Q96LW7 228 aa4.76□□□□□ -1.65
SNHG1-225ENST00000545920 GEMIN7Q9H840 131 aaKnown RBP4.76□□□□□ -1.65
SNHG1-225ENST00000545920 WNK2Q9Y3S1 2297 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 IGLV5-45A0A087WSX0 123 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 IGHV4-61A0A0C4DH41 118 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 F6UB75 175 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 IGHV3-11P01762 117 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 ACYP1P07311 99 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 CD28P10747 220 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 INSL3P51460 131 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 CIRBPQ14011 172 aaKnown RBP4.75□□□□□ -1.65
SNHG1-225ENST00000545920 MIAQ16674 131 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 DEFB121Q5J5C9 76 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 FAM19A3Q7Z5A8 133 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 UBE2E2Q96LR5 201 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 CCL19Q99731 98 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 CITED1Q99966 193 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 TPRP12270 2363 aaKnown RBP4.75□□□□□ -1.65
SNHG1-225ENST00000545920 BDP1A6H8Y1 2624 aa4.75□□□□□ -1.65
SNHG1-225ENST00000545920 CACNA1BQ00975 2339 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 C9JAW5 83 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 SNCGO76070 127 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 IGHV3-30-3P0DP02 117 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 IGHV4-38-2P0DP08 117 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 XGP55808 180 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 Q1RN00 199 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 FAM74A4Q5TZK3 123 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 BRD3OSQ6XYD6 125 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 VSIG2Q96IQ7 327 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 LINC00527Q9UJ94 153 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 SELENOKQ9Y6D0 94 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 PCNX1Q96RV3 2341 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 CEP250Q9BV73 2442 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 TNRC18O15417 2968 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-225ENST00000545920 CFAP54Q96N23 3096 aa4.74□□□□□ -1.65
SNHG1-225ENST00000545920 TRAV8-4A0A0B4J246 113 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 A0A0J9YXV3 536 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 H3BMM0 161 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 NDUFA1O15239 70 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 IGHV3-53P01767 116 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 MT-ATP8P03928 68 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 ATP5J2P56134 94 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 BLCAPP62952 87 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 GAGE2BQ13066 116 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 LY6EQ16553 131 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 GAGE2EQ4V326 116 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 UBE2WQ96B02 151 aa4.73□□□□□ -1.65
SNHG1-225ENST00000545920 LITAFQ99732 161 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms