RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 HLA-DRB4P13762 266 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 RNASE4P34096 147 aaKnown RBP2.71□□□□□ -1.98
LINC01965-204ENST00000545549 NDPQ00604 133 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 CFHR3Q02985 330 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 LY6EQ16553 131 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 TAL2Q16559 108 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 TCTEX1D4Q5JR98 221 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 MUC21Q5SSG8 566 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 ADAMTSL5Q6ZMM2 481 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 TMEM219Q86XT9 240 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 RNF182Q8N6D2 247 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 RNF152Q8N8N0 203 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 WFDC9Q8NEX5 89 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 URB1-AS1Q96HZ7 61 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 DUX5Q96PT3 197 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 SCGB3A1Q96QR1 104 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 B9D2Q9BPU9 175 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 AGPAT4-IT1Q9H0P7 198 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 HIGD1BQ9P298 99 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 SMAD5-AS1Q9Y6J3 95 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 HLA-DRB4X5D2U9 266 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 DNAH6Q9C0G6 4158 aa2.71□□□□□ -1.98
LINC01965-204ENST00000545549 TRGV11A0A075B6L2 103 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 IGHV4-4A0A075B6R2 117 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 A0A087WX48 190 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 IGHV3-49A0A0A0MS15 119 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 TRAV12-1A0A0B4J245 112 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 IGHV7-4-1A0A0J9YVY3 117 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 LINC01546A6NGU7 62 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 PRSS47A8MTI9 375 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 OR11H12B2RN74 326 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 SMKR1H3BMG3 65 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 J3KRW8 73 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 K7EP13 123 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 VCYO14598 125 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 SNAI2O43623 268 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 IGHG2P01859 326 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 EVI2AP22794 236 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 GCSHP23434 173 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 HLA-DMBP28068 263 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 PPIFP30405 207 aaKnown RBP2.7□□□□□ -1.98
LINC01965-204ENST00000545549 ZNF80P51504 273 aaPredicted RBP2.7□□□□□ -1.98
LINC01965-204ENST00000545549 SUMO2P61956 95 aaKnown RBP2.7□□□□□ -1.98
LINC01965-204ENST00000545549 ZC2HC1BQ5TFG8 222 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 AMMECR1LQ6DCA0 310 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 SCGB1D4Q6XE38 83 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 LINC00173Q6ZV60 143 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 OR11H1Q8NG94 326 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 OR11H2Q8NH07 326 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 GLMPQ8WWB7 406 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 HIST1H4GQ99525 98 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 SMIM2Q9BVW6 85 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 RHPN1-AS1Q9BWJ2 59 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 CYSLTR1Q9Y271 337 aa2.7□□□□□ -1.98
LINC01965-204ENST00000545549 CHTOPQ9Y3Y2 248 aaKnown RBP2.7□□□□□ -1.98
LINC01965-204ENST00000545549 IGKV3-7A0A075B6H7 116 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 IGKV3D-20A0A0C4DH25 116 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 GAGE12BA1L429 117 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 F8VRH5 84 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 H3BUT2 72 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 TAX1BP3O14907 124 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 IGHV3-11P01762 117 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 ELANEP08246 267 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 CD7P09564 240 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 NHLRC4P0CG21 123 aaPredicted RBP2.69□□□□□ -1.98
LINC01965-204ENST00000545549 BLCAPP62952 87 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 SMAGPQ0VAQ4 97 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 SRSF9Q13242 221 aaKnown RBP eCLIP2.69□□□□□ -1.98
LINC01965-204ENST00000545549 COTL1Q14019 142 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 GPHB5Q86YW7 130 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 RAB37Q96AX2 223 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 RNF185Q96GF1 192 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 TMEM141Q96I45 108 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 ODF3Q96PU9 254 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 MCRIP2Q9BUT9 160 aaKnown RBP2.69□□□□□ -1.98
LINC01965-204ENST00000545549 CHAC1Q9BUX1 264 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 PEMTQ9UBM1 199 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 SPCS1Q9Y6A9 102 aa2.69□□□□□ -1.98
LINC01965-204ENST00000545549 MUC4Q99102 2169 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 STARD9Q9P2P6 4700 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 TRAV8-2A0A0B4J237 113 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 TRAV8-6A0A0B4J262 113 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 MYMXA0A1B0GTQ4 84 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 A0A1W2PPM0 123 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 LINC01548A6NM66 108 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 PRAC2D3DTV9 90 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 K7EP34 96 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 CCL25O15444 150 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 MALP21145 153 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 CDKN1BP46527 198 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 PCP4P48539 62 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 FXYD7P58549 80 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 RPL32P62910 135 aaKnown RBP2.68□□□□□ -1.98
LINC01965-204ENST00000545549 ZNF56Q15929 161 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 ANXA2RQ3ZCQ2 193 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 OCIAD2Q56VL3 154 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 C2orf66Q6UXQ4 117 aa2.68□□□□□ -1.98
LINC01965-204ENST00000545549 TRPT1Q86TN4 253 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms