RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RNF125Q96EQ8 232 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 MRPL36Q9P0J6 103 aaKnown RBP4.34□□□□□ -1.71
CPSF7-219ENST00000539952 SELENOKQ9Y6D0 94 aa4.34□□□□□ -1.71
CPSF7-219ENST00000539952 A0A1W2PPM0 123 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 D6R8Y8 96 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 K7EMI3 77 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 K7EMT4 169 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 RTL8CO15255 209 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 GNG7O60262 68 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV3-23P01764 117 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 FGF6P10767 208 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 FCGR2BP31994 310 aaPredicted RBP4.33□□□□□ -1.72
CPSF7-219ENST00000539952 ZNF138P52744 262 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 TWIST1Q15672 202 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
CPSF7-219ENST00000539952 Q6ZVH6 145 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 EXOC3-AS1Q8N2X6 119 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 OR8A1Q8NGG7 326 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 SGK494Q96LW2 274 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 CNFNQ9BYD5 112 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 VCX2Q9H322 139 aa4.33□□□□□ -1.72
CPSF7-219ENST00000539952 VPS13DQ5THJ4 4388 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV4-4A0A075B6R2 117 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 H0Y8G0 127 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 H3BUT2 72 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 M0R2N4 97 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 NDUFA4O00483 81 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 MRPS12O15235 138 aaKnown RBP4.32□□□□□ -1.72
CPSF7-219ENST00000539952 CDK2AP2O75956 126 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 IGKV1-17P01599 117 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 IGKCP01834 107 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 IL4P05112 153 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 CACNG7P62955 275 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 C10orf55Q5SWW7 151 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 XP32Q5T750 250 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 UNQ9165/PRO28630Q6UXU0 137 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 Q8N8P6 123 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 ATP6V0BQ99437 205 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 SLC50A1Q9BRV3 221 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 TM2D2Q9BX73 214 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 DAZ1Q9NQZ3 744 aaKnown RBP4.32□□□□□ -1.72
CPSF7-219ENST00000539952 SPCS1Q9Y6A9 102 aa4.32□□□□□ -1.72
CPSF7-219ENST00000539952 IGLV11-55A0A075B6I3 123 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 TRAV8-1A0A0A6YYK1 113 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 K7EIM0 57 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 DEFB4AO15263 64 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 SH2D1AO60880 128 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 DPM2O94777 84 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 PPP1R17O96001 155 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV3-48P01763 117 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 PRSS1P07477 247 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 IGLC6P0CF74 106 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 MIFP14174 115 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 HLA-DMBP28068 263 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 CRIP1P50238 77 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 AMN1Q8IY45 258 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 ZNF502Q8TBZ5 544 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 MRPL53Q96EL3 112 aaKnown RBP4.31□□□□□ -1.72
CPSF7-219ENST00000539952 SIGMAR1Q99720 223 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 VGLL1Q99990 258 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 TIMM8BQ9Y5J9 83 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-219ENST00000539952 S4R3C0 116 aa4.31□□□□□ -1.72
CPSF7-219ENST00000539952 A0A096LNJ9 63 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 TRAV12-1A0A0B4J245 112 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 NCR2O95944 276 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 PLNP26678 52 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 NMUP48645 174 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 LYRM7Q5U5X0 104 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 CEND1Q8N111 149 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 Q8N1X5 172 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 MAPKAPK5-AS1Q8N8E1 139 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 TPPP3Q9BW30 176 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 C21orf62Q9NYP8 219 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 LENEPQ9Y5L5 61 aa4.3□□□□□ -1.72
CPSF7-219ENST00000539952 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 IGHV3-35A0A0C4DH35 117 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 H3BTX0 84 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 TNFRSF6BO95407 300 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 ORM1P02763 201 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 PLA2G1BP04054 148 aaKnown RBP4.29□□□□□ -1.72
CPSF7-219ENST00000539952 LEPP41159 167 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 LAGE3Q14657 143 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 ODF1Q14990 250 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 ORMDL2Q53FV1 153 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 PAPPA-AS1Q5QFB9 102 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 Q6ZTC4 211 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 ZNF575Q86XF7 245 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 Q8NAQ8 132 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 MRAP2Q96G30 205 aa4.29□□□□□ -1.72
CPSF7-219ENST00000539952 C16orf92Q96LL3 132 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms