RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 COPS9Q8WXC6 57 aa2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 AGPAT4-IT1Q9H0P7 198 aa2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 SLC35B3Q9H1N7 401 aa2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 Q9H521 79 aa2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 NAA60Q9H7X0 242 aa2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 INTS1Q8N201 2190 aaKnown RBP2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 MYH7P12883 1935 aa2.44□□□□□ -2.02
AC055720.1-201ENST00000539552 PLXNA2O75051 1894 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 MYO18AQ92614 2054 aaKnown RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 IGKV1D-37A0A075B6S9 117 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 A0A0B4J2C4 111 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 PNMA8CA0A1B0GUJ8 204 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 MDFIC2A0A1B0GVS7 189 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 A0A1W2PQD3 144 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 CREBL2O60519 120 aaPredicted RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 KLF7O75840 302 aaPredicted RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 IGKV3-15P01624 115 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 CD2P06729 351 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 TPT1P13693 172 aaKnown RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 NFYAP23511 347 aaPredicted RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 DYNLT1P63172 113 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 EBI3Q14213 229 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 Q56UQ5 140 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 Q6ZR54 194 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 FAM216BQ8N7L0 139 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 IMMP2LQ96T52 175 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 CHCHD2Q9Y6H1 151 aaPredicted RBP2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 UNC13CQ8NB66 2214 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 PKD1P98161 4303 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 LRP2P98164 4655 aa2.43□□□□□ -2.02
AC055720.1-201ENST00000539552 OR51F1A6NGY5 319 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 C17orf98A8MV24 154 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 H3BT86 120 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 SDCBPO00560 298 aaPredicted RBP2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 CCL16O15467 120 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 YPEL1O60688 119 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 IGHV3-53P01767 116 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 PMP2P02689 132 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 SPINK8P0C7L1 97 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 GZMBP10144 247 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 COX6A1P12074 109 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 IFITM1P13164 125 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 CCL4P13236 92 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 RPL28P46779 137 aaKnown RBP2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 SUPT4H1P63272 117 aaKnown RBP2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 ZNF90Q03938 601 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 KLRD1Q13241 179 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 CDK5R1Q15078 307 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 DEFB116Q30KQ4 102 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 C2orf83Q53S99 150 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 KHDC3LQ587J8 217 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 CLLU1Q5K131 121 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 MRPL54Q6P161 138 aaKnown RBP2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 DPPA3Q6W0C5 159 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 KRTAP7-1Q8IUC3 87 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 Q8N2B8 174 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 CYB561D1Q8N8Q1 229 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 Q8NDZ9 215 aa2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 LSM2Q9Y333 95 aaKnown RBP2.42□□□□□ -2.02
AC055720.1-201ENST00000539552 ZNF638Q14966 1978 aaKnown RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 EML6Q6ZMW3 1958 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 NUP210LQ5VU65 1888 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 DNAH17Q9UFH2 4485 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 GTF3C1Q12789 2109 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 MYH4Q9Y623 1939 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 LCE6AA0A183 80 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 TMEM235A6NFC5 223 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 H3BPC8 53 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 H3BQ85 93 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 M0R129 80 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 GEMIN2O14893 280 aaKnown RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 OR1I1O60431 355 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 CD3DP04234 171 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 ZNF705BP0CI00 300 aaPredicted RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 ZNF19P17023 458 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 BLCAPP62952 87 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 ZNF117Q03924 483 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 FAM229BQ4G0N7 80 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 CCL4L1Q8NHW4 92 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 MRPS24Q96EL2 167 aaKnown RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 LINC00526Q96FQ7 95 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 PKMYT1Q99640 499 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 SEC11CQ9BY50 192 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 NHP2Q9NX24 153 aaKnown RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 RPL26L1Q9UNX3 145 aaKnown RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 ZNF443Q9Y2A4 671 aaPredicted RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 TDRD6O60522 2096 aaKnown RBP2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 PLCE1Q9P212 2302 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 CR1P17927 2039 aa2.41□□□□□ -2.02
AC055720.1-201ENST00000539552 APOC4-APOC2K7ER74 178 aa2.4□□□□□ -2.03
AC055720.1-201ENST00000539552 PITX3O75364 302 aa2.4□□□□□ -2.03
AC055720.1-201ENST00000539552 APOC2P02655 101 aa2.4□□□□□ -2.03
AC055720.1-201ENST00000539552 RBP4P02753 201 aa2.4□□□□□ -2.03
AC055720.1-201ENST00000539552 SAA1P0DJI8 122 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms