RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ORAOV1Q8WV07 137 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 FAM19A4Q96LR4 140 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 IGHV4-4A0A075B6R2 117 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 M0R381 172 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 FCER1GP30273 86 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 APOC4P55056 127 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 ODF1Q14990 250 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 TMEM61Q8N0U2 210 aa5.98□□□□□ -1.45
NEDD8-207ENST00000533242 TRAV25A0A0B4J276 109 aa5.97□□□□□ -1.45
NEDD8-207ENST00000533242 RNASE4P34096 147 aaKnown RBP5.97□□□□□ -1.45
NEDD8-207ENST00000533242 HHLA3Q9XRX5 114 aa5.97□□□□□ -1.45
NEDD8-207ENST00000533242 RNASE3P12724 160 aaKnown RBP5.97□□□□□ -1.45
NEDD8-207ENST00000533242 BOD1L2Q8IYS8 172 aa5.97□□□□□ -1.45
NEDD8-207ENST00000533242 Q8N8P6 123 aa5.97□□□□□ -1.45
NEDD8-207ENST00000533242 OR10J6PQ8NGY7 276 aa5.97□□□□□ -1.45
NEDD8-207ENST00000533242 PHLDA1Q8WV24 401 aaPredicted RBP5.97□□□□□ -1.45
NEDD8-207ENST00000533242 RPL39LQ96EH5 51 aaKnown RBP5.97□□□□□ -1.45
NEDD8-207ENST00000533242 LINC00477Q96M19 166 aa5.97□□□□□ -1.45
NEDD8-207ENST00000533242 NXT2Q9NPJ8 142 aaKnown RBP5.97□□□□□ -1.45
NEDD8-207ENST00000533242 DAZ1Q9NQZ3 744 aaKnown RBP5.97□□□□□ -1.45
NEDD8-207ENST00000533242 CBY3A6NI87 242 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 SMIM17P0DL12 118 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 NMUP48645 174 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 C14orf178Q8N769 122 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-207ENST00000533242 DCANP1Q8TF63 244 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 DEFB104AQ8WTQ1 72 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 RASL10AQ92737 203 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 RNF183Q96D59 192 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 SMPXQ9UHP9 88 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 LENEPQ9Y5L5 61 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 DNAH10Q8IVF4 4471 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 PTTG1IPP53801 180 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 UBE2V1Q13404 147 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 DEFB135Q30KP9 77 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 KIR2DL5BQ8NHK3 375 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 JPT2Q9H910 190 aa5.96□□□□□ -1.46
NEDD8-207ENST00000533242 TRAV8-6A0A0B4J262 113 aa5.95□□□□□ -1.46
NEDD8-207ENST00000533242 TRAV21A0A0B4J279 112 aa5.95□□□□□ -1.46
NEDD8-207ENST00000533242 K7EP13 123 aa5.95□□□□□ -1.46
NEDD8-207ENST00000533242 APRG1Q8IVJ8 170 aa5.95□□□□□ -1.46
NEDD8-207ENST00000533242 FRAS1Q86XX4 4008 aa5.95□□□□□ -1.46
NEDD8-207ENST00000533242 C7orf71A4D174 169 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 PRSS47A8MTI9 375 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 PRSS1P07477 247 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 TMEM97Q5BJF2 176 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 NEGR1Q7Z3B1 354 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
NEDD8-207ENST00000533242 MRPL35Q9NZE8 188 aaKnown RBP5.94□□□□□ -1.46
NEDD8-207ENST00000533242 ZNF688P0C7X2 276 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 S100A4P26447 101 aaKnown RBP5.94□□□□□ -1.46
NEDD8-207ENST00000533242 LAGE3Q14657 143 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
NEDD8-207ENST00000533242 KLLNB2CW77 178 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 IGKV3-20P01619 116 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 ASIPP42127 132 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 LINC00315P59091 139 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 VAMP3Q15836 100 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 SMIM15Q7Z3B0 74 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 RNASE8Q8TDE3 154 aaKnown RBP5.93□□□□□ -1.46
NEDD8-207ENST00000533242 SPAG8Q99932 426 aaPredicted RBP5.93□□□□□ -1.46
NEDD8-207ENST00000533242 PHLDA3Q9Y5J5 127 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 TRAV12-2A0A075B6T6 113 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 K7EMI3 77 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 MGPP08493 103 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 LINC00336Q6ZUF6 198 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 KIF25-AS1Q9Y6Z4 181 aa5.93□□□□□ -1.46
NEDD8-207ENST00000533242 TRAV12-3A0A0B4J271 114 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 IGKCP01834 107 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 SUMO2P61956 95 aaKnown RBP5.92□□□□□ -1.46
NEDD8-207ENST00000533242 PSMG4Q5JS54 123 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 MRAP2Q96G30 205 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 DPH3P1Q9H4G8 78 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 PCLOQ9Y6V0 5065 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 K7EMT4 169 aa5.92□□□□□ -1.46
NEDD8-207ENST00000533242 C11orf68Q9H3H3 251 aaKnown RBP5.92□□□□□ -1.46
NEDD8-207ENST00000533242 A0A087WWL8 130 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 RPL35AP18077 110 aaKnown RBP5.91□□□□□ -1.46
NEDD8-207ENST00000533242 NANOS2P60321 138 aaKnown RBP5.91□□□□□ -1.46
NEDD8-207ENST00000533242 C11orf45Q8TAV5 145 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 MAP6D1Q9H9H5 199 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 MDFICQ9P1T7 246 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 A0A1B0GVY2 172 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 DPM2O94777 84 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 NXPH4O95158 308 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 MED14OSP0DP75 135 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 FXYD2P54710 66 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 ODF3L2Q3SX64 289 aa5.91□□□□□ -1.46
NEDD8-207ENST00000533242 TRBV25-1A0A075B6N4 114 aa5.9□□□□□ -1.46
NEDD8-207ENST00000533242 A0A087WX48 190 aa5.9□□□□□ -1.46
NEDD8-207ENST00000533242 ATP5LO75964 103 aa5.9□□□□□ -1.46
NEDD8-207ENST00000533242 APLNQ9ULZ1 77 aa5.9□□□□□ -1.46
NEDD8-207ENST00000533242 DNAH6Q9C0G6 4158 aa5.9□□□□□ -1.46
NEDD8-207ENST00000533242 TRBV7-9A0A0J9YWB2 115 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 A0A0J9YX75 114 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 K7EQG2 157 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms