RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 A8MTW9 85 aa17.22■□□□□ 0.35
GSDMD-208ENST00000528475 FSHBP01225 129 aa17.22■□□□□ 0.35
GSDMD-208ENST00000528475 CFAP126Q5VTH2 177 aa17.21■□□□□ 0.35
GSDMD-208ENST00000528475 SVIPQ8NHG7 77 aa17.21■□□□□ 0.35
GSDMD-208ENST00000528475 Q6YL49 198 aa17.2■□□□□ 0.34
GSDMD-208ENST00000528475 ATP6V0E2Q8NHE4 81 aa17.2■□□□□ 0.34
GSDMD-208ENST00000528475 TMEM238C9JI98 176 aa17.2■□□□□ 0.34
GSDMD-208ENST00000528475 APOMO95445 188 aa17.2■□□□□ 0.34
GSDMD-208ENST00000528475 TGFAP01135 160 aa17.2■□□□□ 0.34
GSDMD-208ENST00000528475 OPRPNQ99935 248 aaPredicted RBP17.2■□□□□ 0.34
GSDMD-208ENST00000528475 SPATA25Q9BR10 227 aa17.2■□□□□ 0.34
GSDMD-208ENST00000528475 VPS13CQ709C8 3753 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 DUX5Q96PT3 197 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 TSSC4Q9Y5U2 329 aaPredicted RBP17.19■□□□□ 0.34
GSDMD-208ENST00000528475 IGLV4-3A0A075B6K6 122 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 GAGE12HA6NDE8 117 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 CFC1BP0CG36 223 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 CFC1P0CG37 223 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 RBMY1A1P0DJD3 496 aaKnown RBP17.19■□□□□ 0.34
GSDMD-208ENST00000528475 RBMY1CP0DJD4 496 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 ZNF22P17026 224 aaPredicted RBP17.19■□□□□ 0.34
GSDMD-208ENST00000528475 RBMY1FQ15415 496 aaKnown RBP17.19■□□□□ 0.34
GSDMD-208ENST00000528475 TCTEX1D4Q5JR98 221 aa17.19■□□□□ 0.34
GSDMD-208ENST00000528475 MTURNQ8N3F0 131 aa17.18■□□□□ 0.34
GSDMD-208ENST00000528475 PYGO1Q9Y3Y4 419 aa17.18■□□□□ 0.34
GSDMD-208ENST00000528475 RHODO00212 210 aa17.17■□□□□ 0.34
GSDMD-208ENST00000528475 SIGMAR1Q99720 223 aa17.17■□□□□ 0.34
GSDMD-208ENST00000528475 SCGB1A1P11684 91 aa17.17■□□□□ 0.34
GSDMD-208ENST00000528475 C10orf126Q8N4M7 172 aa17.17■□□□□ 0.34
GSDMD-208ENST00000528475 TRAV2A0A0B4J234 112 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 LOC107984156A0A0G2JMH3 177 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 SMCPP49901 116 aaPredicted RBP17.16■□□□□ 0.34
GSDMD-208ENST00000528475 CRYBA4P53673 196 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 Q5PR19 223 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 PIK3CD-AS1Q5SR53 167 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 ARL17AQ8IVW1 177 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 VCX2Q9H322 139 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 USP9XQ93008 2570 aaPredicted RBP17.16■□□□□ 0.34
GSDMD-208ENST00000528475 PSMB2P49721 201 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 FLNCQ14315 2725 aa17.16■□□□□ 0.34
GSDMD-208ENST00000528475 TRBV20-1A0A075B6N2 111 aa17.15■□□□□ 0.34
GSDMD-208ENST00000528475 C1QTNF4Q9BXJ3 329 aa17.15■□□□□ 0.34
GSDMD-208ENST00000528475 PTH2Q96A98 100 aa17.14■□□□□ 0.33
GSDMD-208ENST00000528475 KNCNA6PVL3 124 aa17.14■□□□□ 0.33
GSDMD-208ENST00000528475 PRO1854Q9UHT4 67 aa17.14■□□□□ 0.33
GSDMD-208ENST00000528475 A0A0J9YXV3 536 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 A8MWV9 139 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 H3BMM0 161 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 AZU1P20160 251 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 DEFB131AP59861 70 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 COL12A1Q99715 3063 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 ZFYVE26Q68DK2 2539 aa17.12■□□□□ 0.33
GSDMD-208ENST00000528475 FOXI1Q12951 378 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 CSPG4Q6UVK1 2322 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 M0R2P5 195 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 INSL3P51460 131 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 SLURP1P55000 103 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 FAM104AQ969W3 186 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 GTSF1LQ9H1H1 148 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 ZNF462Q96JM2 2506 aa17.11■□□□□ 0.33
GSDMD-208ENST00000528475 MRPS36P82909 103 aaKnown RBP17.1■□□□□ 0.33
GSDMD-208ENST00000528475 SBSPONQ8IVN8 264 aa17.1■□□□□ 0.33
GSDMD-208ENST00000528475 Q8N2B8 174 aa17.1■□□□□ 0.33
GSDMD-208ENST00000528475 MAPK1IP1LQ8NDC0 245 aa17.1■□□□□ 0.33
GSDMD-208ENST00000528475 RBMY1BA6NDE4 496 aaKnown RBP17.09■□□□□ 0.33
GSDMD-208ENST00000528475 RBMY1EA6NEQ0 496 aaKnown RBP17.09■□□□□ 0.33
GSDMD-208ENST00000528475 TCL1BO95988 128 aa17.09■□□□□ 0.33
GSDMD-208ENST00000528475 RBMY1DP0C7P1 496 aaKnown RBP17.09■□□□□ 0.33
GSDMD-208ENST00000528475 IGHV4-31P0DP07 118 aa17.09■□□□□ 0.33
GSDMD-208ENST00000528475 SPG11Q96JI7 2443 aa17.09■□□□□ 0.33
GSDMD-208ENST00000528475 A0A0B4J2C4 111 aa17.09■□□□□ 0.33
GSDMD-208ENST00000528475 SFTA2Q6UW10 78 aa17.09■□□□□ 0.33
GSDMD-208ENST00000528475 A4D1N5 150 aa17.08■□□□□ 0.33
GSDMD-208ENST00000528475 CD28P10747 220 aa17.08■□□□□ 0.33
GSDMD-208ENST00000528475 ZNF415Q09FC8 603 aa17.08■□□□□ 0.33
GSDMD-208ENST00000528475 LINC00467Q9BRT7 94 aa17.08■□□□□ 0.33
GSDMD-208ENST00000528475 TNFRSF18Q9Y5U5 241 aa17.08■□□□□ 0.33
GSDMD-208ENST00000528475 DOPEY2Q9Y3R5 2298 aa17.08■□□□□ 0.32
GSDMD-208ENST00000528475 DUX3Q96PT4 197 aa17.08■□□□□ 0.32
GSDMD-208ENST00000528475 BEX4Q9NWD9 120 aaPredicted RBP17.08■□□□□ 0.32
GSDMD-208ENST00000528475 PROK1P58294 105 aa17.07■□□□□ 0.32
GSDMD-208ENST00000528475 TMEM263Q8WUH6 116 aaKnown RBP17.07■□□□□ 0.32
GSDMD-208ENST00000528475 PEMTQ9UBM1 199 aa17.07■□□□□ 0.32
GSDMD-208ENST00000528475 MYO18BQ8IUG5 2567 aa17.07■□□□□ 0.32
GSDMD-208ENST00000528475 C18orf65Q6ZTR6 163 aa17.06■□□□□ 0.32
GSDMD-208ENST00000528475 IGHV3-73A0A0B4J1V6 119 aa17.06■□□□□ 0.32
GSDMD-208ENST00000528475 IGHV3-33P01772 117 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 HTN1P15515 57 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 DEFB136Q30KP8 78 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 IGHV3-64A0A075B6Q5 118 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 A0A0J9YXY3 114 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 EIF4EBP3O60516 100 aaPredicted RBP17.05■□□□□ 0.32
GSDMD-208ENST00000528475 IGHV3-30-3P0DP02 117 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 MUSTN1Q8IVN3 82 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 ZNF418Q8TF45 676 aaPredicted RBP17.05■□□□□ 0.32
GSDMD-208ENST00000528475 TIMM21Q9BVV7 248 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 SPANXA1Q9NS26 97 aa17.05■□□□□ 0.32
GSDMD-208ENST00000528475 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.04■□□□□ 0.32
GSDMD-208ENST00000528475 TEN1Q86WV5 123 aa17.04■□□□□ 0.32
GSDMD-208ENST00000528475 TMEM61Q8N0U2 210 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms