RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 LGALS9O00182 355 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 SOCS3O14543 225 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 LTAP01374 205 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 CXCL1P09341 107 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 ZNF705DP0CH99 300 aaPredicted RBP3.08□□□□□ -1.92
CD44-226ENST00000527889 ZNF705BP0CI00 300 aaPredicted RBP3.08□□□□□ -1.92
CD44-226ENST00000527889 LINC00322Q6ZN03 302 aaPredicted RBP3.08□□□□□ -1.92
CD44-226ENST00000527889 LINC01561Q8N1V8 128 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 OR10G8Q8NGN5 311 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 ZC2HC1AQ96GY0 325 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 LINC00477Q96M19 166 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 AP1S3Q96PC3 154 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 C1QTNF4Q9BXJ3 329 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 SAMD10Q9BYL1 202 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 GTSF1LQ9H1H1 148 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 NRN1Q9NPD7 142 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 KLF12Q9Y4X4 402 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 LY96Q9Y6Y9 160 aa3.08□□□□□ -1.92
CD44-226ENST00000527889 DNAH3Q8TD57 4116 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 TRBV6-1A0A0K0K1D8 114 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 IZUMO1RA6ND01 250 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 ZNF705GA8MUZ8 300 aaPredicted RBP3.07□□□□□ -1.92
CD44-226ENST00000527889 C9JAW5 83 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 OVOL1O14753 267 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 PFN1P07737 140 aaKnown RBP3.07□□□□□ -1.92
CD44-226ENST00000527889 ZNF688P0C7X2 276 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 GZMBP10144 247 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 CBLN1P23435 193 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 SRIP30626 198 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 LAGE3Q14657 143 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 ELOBQ15370 118 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 IQCJQ1A5X6 159 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 IBA57Q5T440 356 aaKnown RBP3.07□□□□□ -1.92
CD44-226ENST00000527889 LYRM7Q5U5X0 104 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 Q6ZVQ6 151 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 ZNF575Q86XF7 245 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 TMEM183AQ8IXX5 376 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 DYNLRB2Q8TF09 96 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 DCANP1Q8TF63 244 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 OSTCQ9NRP0 149 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 V9GYV3 84 aa3.07□□□□□ -1.92
CD44-226ENST00000527889 TMSB15BA0A087X1C1 80 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 FAM236DA0A1B0GTK5 79 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 C19orf71A6NCJ1 209 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 K7EQG2 157 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 SPINK4O60575 86 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 SH2D1AO60880 128 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 P01737 135 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 CT45A10P0DMU9 189 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 FAM236CP0DP71 79 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 RPS10P46783 165 aaKnown RBP3.06□□□□□ -1.92
CD44-226ENST00000527889 CRIP1P50238 77 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 ZNF80P51504 273 aaPredicted RBP3.06□□□□□ -1.92
CD44-226ENST00000527889 HSD52Q0P140 79 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 KRTAP24-1Q3LI83 254 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 PSMG4Q5JS54 123 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 PRR9Q5T870 116 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 GDF5OSQ5U4N7 250 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 RASL11AQ6T310 242 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 ZNF705AQ6ZN79 300 aaPredicted RBP3.06□□□□□ -1.92
CD44-226ENST00000527889 Q6ZQT7 251 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 C9orf47Q6ZRZ4 202 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 NFE4Q86UQ8 179 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 NDUFA11Q86Y39 141 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 TMEM61Q8N0U2 210 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 OR8A1Q8NGG7 326 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 OR10D4PQ8NGN7 298 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 OR10J6PQ8NGY7 276 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 KIR2DL4Q99706 377 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 AGPAT4-IT1Q9H0P7 198 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 RPP21Q9H633 154 aaKnown RBP3.06□□□□□ -1.92
CD44-226ENST00000527889 TUBA4BQ9H853 241 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 TMEM242Q9NWH2 141 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 IL36BQ9NZH7 164 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 ZNF492Q9P255 531 aa3.06□□□□□ -1.92
CD44-226ENST00000527889 TRBV24-1A0A075B6N3 115 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 RBAKDNA6NC62 111 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 KNCNA6PVL3 124 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.05□□□□□ -1.92
CD44-226ENST00000527889 OXTP01178 125 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 IGKV3-20P01619 116 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 ZNF138P52744 262 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 SNRPD3P62318 126 aaKnown RBP3.05□□□□□ -1.92
CD44-226ENST00000527889 RIGQ13278 110 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 JOSD1Q15040 202 aaPredicted RBP3.05□□□□□ -1.92
CD44-226ENST00000527889 DEFB114Q30KQ6 69 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 MRPL54Q6P161 138 aaKnown RBP3.05□□□□□ -1.92
CD44-226ENST00000527889 Q6ZVH6 145 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 PLEKHB2Q96CS7 222 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 FAM218AQ96MZ4 157 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 CYSLTR1Q9Y271 337 aa3.05□□□□□ -1.92
CD44-226ENST00000527889 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
CD44-226ENST00000527889 A0A0J9YX75 114 aa3.04□□□□□ -1.92
CD44-226ENST00000527889 MUC21A0A140T8X8 626 aa3.04□□□□□ -1.92
CD44-226ENST00000527889 SMIM27A0A1W2PRY6 76 aa3.04□□□□□ -1.92
CD44-226ENST00000527889 GRIFINA4D1Z8 144 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms