RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 C15orf53Q8NAA6 179 aa5.82□□□□□ -1.48
VPS13B-210ENST00000521932 NUP35Q8NFH5 326 aa5.82□□□□□ -1.48
VPS13B-210ENST00000521932 VSIG2Q96IQ7 327 aa5.82□□□□□ -1.48
VPS13B-210ENST00000521932 PGLYRP4Q96LB8 373 aa5.82□□□□□ -1.48
VPS13B-210ENST00000521932 TMEM242Q9NWH2 141 aa5.82□□□□□ -1.48
VPS13B-210ENST00000521932 A0A1B0GUT8 65 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 FAM3BP58499 235 aaPredicted RBP5.81□□□□□ -1.48
VPS13B-210ENST00000521932 SSTP61278 116 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 TWIST1Q15672 202 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 SLC25A29Q8N8R3 303 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 AP1S3Q96PC3 154 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 IMMP2LQ96T52 175 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 CTDSP1Q9GZU7 261 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 STARD9Q9P2P6 4700 aa5.81□□□□□ -1.48
VPS13B-210ENST00000521932 A0A087WWC5 75 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 IGHV3-73A0A0B4J1V6 119 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 A0A0J9YY99 117 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 TRGC1P0CF51 173 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 EVI2AP22794 236 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 PCP4P48539 62 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 RAB4BP61018 213 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 FAM74A4Q5TZK3 123 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 C14orf178Q8N769 122 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-210ENST00000521932 BORCS7Q96B45 105 aa5.8□□□□□ -1.48
VPS13B-210ENST00000521932 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
VPS13B-210ENST00000521932 NACAE9PAV3 2078 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 A0A096LPF7 62 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 C7orf77A4D0Y5 90 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 K7EQD1 137 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 APOC3P02656 99 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 SMIM17P0DL12 118 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 RHEBQ15382 184 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 RHOHQ15669 191 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 SVBPQ8N300 66 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 PRADC1Q9BSG0 188 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 TMEM191AQ9H0A3 160 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 DPH3P1Q9H4G8 78 aa5.79□□□□□ -1.48
VPS13B-210ENST00000521932 TRBV10-1A0A0K0K1A3 114 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 A0A1B0GW15 77 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 SNAPINO95295 136 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 RIGQ13278 110 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 MRPL23Q16540 153 aaKnown RBP5.78□□□□□ -1.48
VPS13B-210ENST00000521932 ATP5L2Q7Z4Y8 100 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 FRZBQ92765 325 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 ICOSQ9Y6W8 199 aa5.78□□□□□ -1.48
VPS13B-210ENST00000521932 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 M0QY20 66 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 NUDT3O95989 172 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 ZNF56Q15929 161 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 LGALS9CQ6DKI2 356 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 SMIM15Q7Z3B0 74 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 SH2D6Q7Z4S9 175 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 GATD1Q8NB37 220 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 RPS10P5Q9NQ39 176 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 Q9UF83 564 aa5.77□□□□□ -1.49
VPS13B-210ENST00000521932 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 LOC100131303A0A0U1RQF7 123 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 H7C1H1 209 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 NPSP0C0P6 89 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 P0DMU3 169 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 RAB4AP20338 218 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 HBBP68871 147 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 KCNIP4Q6PIL6 250 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 NEGR1Q7Z3B1 354 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 RNF185Q96GF1 192 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 BTF3L4Q96K17 158 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
VPS13B-210ENST00000521932 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 PRSS47A8MTI9 375 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 S100A8P05109 93 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 SRIP30626 198 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 CCL18P55774 89 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 RPL36AP83881 106 aaKnown RBP5.75□□□□□ -1.49
VPS13B-210ENST00000521932 ESRGQ1W209 222 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 FAM104BQ5XKR9 115 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 MRPL54Q6P161 138 aaKnown RBP5.75□□□□□ -1.49
VPS13B-210ENST00000521932 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 LYPD5Q6UWN5 251 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 AMN1Q8IY45 258 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 NEXN-AS1Q8NBZ9 246 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
VPS13B-210ENST00000521932 DNAJC30Q96LL9 226 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 NIT2Q9NQR4 276 aa5.75□□□□□ -1.49
VPS13B-210ENST00000521932 VPS13DQ5THJ4 4388 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 DNAH1Q9P2D7 4330 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 SACSQ9NZJ4 4579 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 GAGE12JA6NER3 117 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 MGPP08493 103 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 S100PP25815 95 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 CAMPP49913 170 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 GAGE1Q13065 139 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 GAGE4Q13068 117 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 GAGE5Q13069 117 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 ATRAIDQ6UW56 229 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms