RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 KDM5AP29375 1690 aaKnown RBP-0.3□□□□□ -2.46
SNHG6-202ENST00000520619 ZNF142P52746 1687 aaPredicted RBP-0.3□□□□□ -2.46
SNHG6-202ENST00000520619 CEP250Q9BV73 2442 aa-0.3□□□□□ -2.46
SNHG6-202ENST00000520619 DNAH2Q9P225 4427 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 F8P00451 2351 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 TEX49A0A1B0GTD5 131 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 EMX2Q04743 252 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 IQCJQ1A5X6 159 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 OR9Q1Q8NGQ5 310 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 CCDC115Q96NT0 180 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 DSCR8Q96T75 97 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 CSPG4Q6UVK1 2322 aa-0.31□□□□□ -2.46
SNHG6-202ENST00000520619 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.32□□□□□ -2.464e-11■■■■■ 43.3
SNHG6-202ENST00000520619 DNAH14Q0VDD8 3507 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 PRUNE2Q8WUY3 3088 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 CEP290O15078 2479 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 ELOF1P60002 83 aaKnown RBP-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 KRTAP6-2Q3LI66 62 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 PRR15LQ9BU68 103 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 LINC00846Q9NV44 126 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 METTL1Q9UBP6 276 aaKnown RBP-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 NDUFAF1Q9Y375 327 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 SPTA1P02549 2419 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 VIRMAQ69YN4 1812 aaKnown RBP-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 KDM5CP41229 1560 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 XIRP2A4UGR9 3374 aa-0.32□□□□□ -2.46
SNHG6-202ENST00000520619 CDK13Q14004 1512 aaKnown RBP-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 XIRP1Q702N8 1843 aaKnown RBP-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 PTPRQQ9UMZ3 2332 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 TRAV12-2A0A075B6T6 113 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 PNMA8CA0A1B0GUJ8 204 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 TCRAP04437 139 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 SDC4P31431 198 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 POLR2JP52435 117 aaKnown RBP-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 UNQ5815/PRO19632Q6UWF5 114 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 PPDPFLQ8WWR9 84 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 CENPHQ9H3R5 247 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 U3KQA8 63 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 SSC5DA1L4H1 1573 aa-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 SPTAN1Q13813 2472 aaKnown RBP-0.33□□□□□ -2.46
SNHG6-202ENST00000520619 PTPRMP28827 1452 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 CASZ1Q86V15 1759 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 ASXL3Q9C0F0 2248 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 GOLGB1Q14789 3259 aaKnown RBP-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 GVQW2A0A096LPI5 108 aaPredicted RBP-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 C10orf142B7Z368 130 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 C9JAW5 83 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 SYNJ1O43426 1573 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 IFNA21P01568 189 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 PCBD1P61457 104 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 TFAMQ00059 246 aaKnown RBP-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 PLGLB1Q02325 96 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 HSD17B12Q53GQ0 312 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 TMEM128Q5BJH2 165 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 TMEM141Q96I45 108 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 BET1LQ9NYM9 111 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 ESPL1Q14674 2120 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 LAMB1P07942 1786 aa-0.34□□□□□ -2.46
SNHG6-202ENST00000520619 OVOS2A0A0G2JMS6 1433 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 A0A087WTM6 91 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 A0A1B0GV72 72 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 SMR3BP02814 79 aaPredicted RBP-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 FABP1P07148 127 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 RPS28P62857 69 aaKnown RBP-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 SAMD13Q5VXD3 122 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 OR2T2Q6IF00 324 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 COA4Q9NYJ1 87 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 ACACAQ13085 2346 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 HELZP42694 1942 aaKnown RBP-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 ARAP1Q96P48 1450 aa-0.35□□□□□ -2.47
SNHG6-202ENST00000520619 TRRAPQ9Y4A5 3859 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 TRAV2A0A0B4J234 112 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 MT1BP07438 61 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 HIST1H1BP16401 226 aaKnown RBP-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 AKR1D1P51857 326 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 TMEM91Q6ZNR0 172 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 SLC25A26Q70HW3 274 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 KRTAP8-1Q8IUC2 63 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 PPP1R1CQ8WVI7 109 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 DDA1Q9BW61 102 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 BPESC1Q9GZL8 116 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 TAS2R8Q9NYW2 309 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 DNAJC15Q9Y5T4 150 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 UHRF1BP1LA0JNW5 1464 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 SMARCA2P51531 1590 aa-0.36□□□□□ -2.47
SNHG6-202ENST00000520619 CCDC171Q6TFL3 1326 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 PLXNA1Q9UIW2 1896 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 SMG1Q96Q15 3661 aaKnown RBP-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 PHLPP1O60346 1717 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 TRAV17A0A0B4J275 112 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 F2Z2F3 143 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 TFF1P04155 84 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 PSPHP78330 225 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 COX6A2Q02221 97 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 VPS25Q9BRG1 176 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 SLC35B3Q9H1N7 401 aa-0.37□□□□□ -2.47
SNHG6-202ENST00000520619 ABCA1O95477 2261 aa-0.38□□□□□ -2.47
SNHG6-202ENST00000520619 A0A1B0GW64 132 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms