RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 PGRMC1O00264 195 aaKnown RBP-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 CETN3O15182 167 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 DEXIO95424 95 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 TPM2P07951 284 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 TPM1P09493 284 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 HIST1H1EP10412 219 aaKnown RBP-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 CYBAP13498 195 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 INSL3P51460 131 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 EDDM3BP56851 147 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 PCBD1P61457 104 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 NCALDP61601 193 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 SPCS2Q15005 226 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 TMED2Q15363 201 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 TMEM170BQ5T4T1 132 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 IFI27L1Q96BM0 104 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 BORCS8Q96FH0 119 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 USMG5Q96IX5 58 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 AMELXQ99217 191 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 SIGMAR1Q99720 223 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 RNASE7Q9H1E1 156 aaKnown RBP-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 NAA60Q9H7X0 242 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 STOML2Q9UJZ1 356 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 GUCA1BQ9UMX6 200 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 PRELID3BQ9Y3B1 194 aa-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 FAM32AQ9Y421 112 aaKnown RBP-0.54□□□□□ -2.5
RNU4-49P-201ENST00000516080 TROQ12816 1431 aaPredicted RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 TET3O43151 1660 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 RAD50Q92878 1312 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 BORCS7-ASMTA0A0B4J1R7 106 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRAV12-3A0A0B4J271 114 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 CTXND1A0A1B0GTU2 59 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 A6NIN4 97 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 SMIM23A6NLE4 172 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 CPSF4LA6NMK7 179 aaKnown RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 PPP5D1E7EU14 171 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 BRI3O95415 125 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 MT1AP04731 61 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 IFNA16P05015 189 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 S100A9P06702 114 aaKnown RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 RPS17P08708 135 aaKnown RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 SLC25A4P12235 298 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 SDC2P34741 201 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 UBE2D3P61077 147 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 ERVS71-1P61550 626 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 UBE2D2P62837 147 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 PLGLB1Q02325 96 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 RTL8BQ17RB0 113 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 RPL7L1Q6DKI1 246 aaKnown RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 OR2T2Q6IF00 324 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 Q6JHZ5 121 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 SCIMPQ6UWF3 145 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 TMEM91Q6ZNR0 172 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 AKAP14Q86UN6 197 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 NDUFA11Q86Y39 141 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 CTAGE3PQ8IX95 158 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 CNPY4Q8N129 248 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 MORN4Q8NDC4 146 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 OR51A4Q8NGJ6 313 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 OTOSQ8NHW6 89 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 RTL8AQ9BWD3 113 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 NMNAT1Q9HAN9 279 aaPredicted RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 TAF9BQ9HBM6 251 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 LAMTOR3Q9UHA4 124 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 NDUFAF1Q9Y375 327 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 R4GMQ9 66 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 SETBP1Q9Y6X0 1596 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 ZMYM4Q5VZL5 1548 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 FAT3Q8TDW7 4589 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 FAM186AA6NE01 2351 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 CCDC141Q6ZP82 1450 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 LRRC37AA6NMS7 1700 aa-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 USP9XQ93008 2570 aaPredicted RBP-0.55□□□□□ -2.5
RNU4-49P-201ENST00000516080 CELSR3Q9NYQ7 3312 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 PDE4DIPQ5VU43 2346 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 COL12A1Q99715 3063 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRAV30A0A087WSZ9 112 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 A0A087WUJ7 227 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRAV2A0A0B4J234 112 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRBV7-4A0A0J9YYF1 115 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 CXorf51AA0A1B0GTR3 108 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 F8VRH5 84 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 CCDC179H3BU77 68 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 ARPC5O15511 151 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 APOC3P02656 99 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 RBP4P02753 201 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 SLC25A6P12236 298 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 PIPP12273 146 aaPredicted RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 HIST1H1BP16401 226 aaKnown RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 PTMSP20962 102 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 SRP9P49458 86 aaKnown RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 NPC2P61916 151 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 BLCAPP62952 87 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 COX17Q14061 63 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 LIN52Q52LA3 116 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 TMEM97Q5BJF2 176 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 Q5VV11 94 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 SLC25A26Q70HW3 274 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 SNX29P2Q8IUI4 249 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 Q8N8P6 123 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 DYNLRB2Q8TF09 96 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms