RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 EXOC3-AS1Q8N2X6 119 aa4.46□□□□□ -1.7
NPHP3-211ENST00000515289 GNB1LQ9BYB4 327 aa4.46□□□□□ -1.7
NPHP3-211ENST00000515289 BIN3Q9NQY0 253 aa4.46□□□□□ -1.7
NPHP3-211ENST00000515289 IL36BQ9NZH7 164 aa4.46□□□□□ -1.7
NPHP3-211ENST00000515289 SMAD5-AS1Q9Y6J3 95 aa4.46□□□□□ -1.7
NPHP3-211ENST00000515289 TRAV9-1A0A075B6T8 112 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 ZNF207O43670 478 aaKnown RBP4.45□□□□□ -1.7
NPHP3-211ENST00000515289 ZNF861PO60384 105 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BKO60814 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 LTAP01374 205 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 TRGV3P03979 118 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BJP06899 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BOP23527 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 S100PP25815 95 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BBP33778 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BDP58876 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BCP62807 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 KRTAP1-1Q07627 177 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 PDE6HQ13956 83 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 BATFQ16520 125 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST2H2BEQ16778 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-211ENST00000515289 BAGE2Q86Y30 109 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 WFDC11Q8NEX6 87 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 CIRBP-AS1Q8TBR5 109 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 FRZBQ92765 325 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BHQ93079 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BNQ99877 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 HIST1H2BMQ99879 126 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 RNASE7Q9H1E1 156 aaKnown RBP4.45□□□□□ -1.7
NPHP3-211ENST00000515289 ZNF492Q9P255 531 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 RABAC1Q9UI14 185 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 CREBBPQ92793 2442 aa4.45□□□□□ -1.7
NPHP3-211ENST00000515289 CHD6Q8TD26 2715 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 IGHV3OR16-8A0A075B7F1 116 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 TRAV8-1A0A0A6YYK1 113 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 SMIM27A0A1W2PRY6 76 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 C19orf71A6NCJ1 209 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 PPP5D1E7EU14 171 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 M0R3E3 92 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 TRGC1P0CF51 173 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 MGST1P10620 155 aaKnown RBP4.44□□□□□ -1.7
NPHP3-211ENST00000515289 RPL7P18124 248 aaKnown RBP4.44□□□□□ -1.7
NPHP3-211ENST00000515289 TPPP2P59282 170 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 CYB5R2Q6BCY4 276 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 LINC00322Q6ZN03 302 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-211ENST00000515289 GOLT1AQ6ZVE7 132 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 TMEM75Q8N9X5 138 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 OR2K2Q8NGT1 345 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 USMG5Q96IX5 58 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 GPR82Q96P67 336 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 VPREB3Q9UKI3 123 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 DOPEY2Q9Y3R5 2298 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 ABCA12Q86UK0 2595 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 CSPG4Q6UVK1 2322 aa4.44□□□□□ -1.7
NPHP3-211ENST00000515289 TACC2O95359 2948 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 ASH1LQ9NR48 2969 aaKnown RBP4.43□□□□□ -1.7
NPHP3-211ENST00000515289 A0A096LNJ9 63 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 PSMB8P28062 276 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 HLA-DMBP28068 263 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 UBE2G1P62253 170 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 IBA57Q5T440 356 aaKnown RBP4.43□□□□□ -1.7
NPHP3-211ENST00000515289 C1orf194Q5T5A4 169 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 C10orf99Q6UWK7 81 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 UNQ9165/PRO28630Q6UXU0 137 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 Q8N2B8 174 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 MYOZ3Q8TDC0 251 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 BTF3L4Q96K17 158 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 ZNF331Q9NQX6 463 aaPredicted RBP4.43□□□□□ -1.7
NPHP3-211ENST00000515289 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
NPHP3-211ENST00000515289 ANKRD17O75179 2603 aaKnown RBP4.42□□□□□ -1.7
NPHP3-211ENST00000515289 UTP20O75691 2785 aaKnown RBP4.42□□□□□ -1.7
NPHP3-211ENST00000515289 IGKV2-40A0A087WW87 121 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-211ENST00000515289 NDUFA4O00483 81 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 IGKV2D-40P01614 121 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-211ENST00000515289 PRB4P10163 310 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-211ENST00000515289 S100A7P31151 101 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 PSG9Q00887 426 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 FABP9Q0Z7S8 132 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-211ENST00000515289 GPHB5Q86YW7 130 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 OR8I2Q8N0Y5 310 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 OR4X2Q8NGF9 303 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 CMTM2Q8TAZ6 248 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 ZC2HC1AQ96GY0 325 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 GTSF1LQ9H1H1 148 aa4.42□□□□□ -1.7
NPHP3-211ENST00000515289 IZUMO1RA6ND01 250 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 CBLN1P23435 193 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 CRIP1P50238 77 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 NDUFA6P56556 154 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 RPL19P84098 196 aaKnown RBP4.41□□□□□ -1.7
NPHP3-211ENST00000515289 GDF5OSQ5U4N7 250 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 TMEM136Q6ZRR5 245 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 ATP5L2Q7Z4Y8 100 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 HIST3H2BBQ8N257 126 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 SIGLECL1Q8N7X8 197 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 TSKUQ8WUA8 353 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms