RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 FAM236AA0A1B0GUQ0 79 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 FAM236BA0A1B0GV22 79 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 EFCAB10A6NFE3 127 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 F2Z2F3 143 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 SNCGO76070 127 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 PIRTP0C851 137 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 C9orf116Q5BN46 136 aaPredicted RBP0.54□□□□□ -2.32
PHF3-211ENST00000514822 SLC48A1Q6P1K1 146 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 Q6ZUT4 128 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 TSKUQ8WUA8 353 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 TMEM242Q9NWH2 141 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 NDUFA12Q9UI09 145 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 CEP152O94986 1710 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 ANK1P16157 1881 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 NAIPQ13075 1403 aa0.54□□□□□ -2.32
PHF3-211ENST00000514822 DSPP15924 2871 aaKnown RBP0.54□□□□□ -2.32
PHF3-211ENST00000514822 CDK12Q9NYV4 1490 aaPredicted RBP0.54□□□□□ -2.32
PHF3-211ENST00000514822 WDR97A6NE52 1622 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 PHRF1Q9P1Y6 1649 aaKnown RBP0.53□□□□□ -2.32
PHF3-211ENST00000514822 PRRC2CQ9Y520 2896 aaKnown RBP0.53□□□□□ -2.32
PHF3-211ENST00000514822 A0A0D9SG42 100 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 IL5P05113 134 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 SMIM6P0DI80 62 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 CBLN1P23435 193 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 ARL11Q969Q4 196 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 IFI27L1Q96BM0 104 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 POLQO75417 2590 aa0.53□□□□□ -2.32
PHF3-211ENST00000514822 ZFHX3Q15911 3703 aa0.53□□□□□ -2.33
PHF3-211ENST00000514822 CELSR1Q9NYQ6 3014 aa0.53□□□□□ -2.33
PHF3-211ENST00000514822 ABCA4P78363 2273 aa0.53□□□□□ -2.33
PHF3-211ENST00000514822 RELNP78509 3460 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 ACACBO00763 2458 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 TRAV12-3A0A0B4J271 114 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 FAM25AB3EWG3 89 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 FAM25CB3EWG5 89 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 FAM25GB3EWG6 89 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 EMX2Q04743 252 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 MIC13Q5XKP0 118 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 C12orf73Q69YU5 71 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 COX7B2Q8TF08 81 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 SPANXDQ9BXN6 97 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 BPESC1Q9GZL8 116 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 RERGLQ9H628 205 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 PLAC8Q9NZF1 115 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 V9GYV3 84 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 CPDO75976 1380 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 ERCC6Q03468 1493 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 REV3LO60673 3130 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.52□□□□□ -2.33
PHF3-211ENST00000514822 TRPM7Q96QT4 1865 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 CDK5RAP2Q96SN8 1893 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 C2CD3Q4AC94 2353 aa0.52□□□□□ -2.33
PHF3-211ENST00000514822 COL7A1Q02388 2944 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 MKI67P46013 3256 aaKnown RBP0.51□□□□□ -2.33
PHF3-211ENST00000514822 SPEGQ15772 3267 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 TRBV7-1A0A0A6YYK4 115 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 K7EP13 123 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 NDUFA2O43678 99 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 TGP01266 2768 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 CCL3L1P16619 93 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 ELOF1P60002 83 aaKnown RBP0.51□□□□□ -2.33
PHF3-211ENST00000514822 ATRQ13535 2644 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 ZNF818PQ6ZRF7 136 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 DPH3Q96FX2 82 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 SDF2Q99470 211 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 SNRNP25Q9BV90 132 aaKnown RBP0.51□□□□□ -2.33
PHF3-211ENST00000514822 LINC00470Q9BZP3 86 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 HERC2O95714 4834 aa0.51□□□□□ -2.33
PHF3-211ENST00000514822 KDM6BO15054 1643 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 APODP05090 189 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 FGF7P21781 194 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 BTG2P78543 158 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 NAA60Q9H7X0 242 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 FAM208BQ5VWN6 2430 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 ESPL1Q14674 2120 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 DNAH12Q6ZR08 3092 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 HMCN2Q8NDA2 5059 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 CELSR2Q9HCU4 2923 aa0.5□□□□□ -2.33
PHF3-211ENST00000514822 CTTNBP2Q8WZ74 1663 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 EP400Q96L91 3159 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 MYO7AQ13402 2215 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 LY6G6CO95867 125 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 UBE2G1P62253 170 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 CCL8P80075 99 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 C20orf197Q8N268 126 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 SMIM11BQ8TCY0 68 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 FAM107BQ9H098 131 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 TEX15Q9BXT5 2789 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 UNC80Q8N2C7 3258 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 LRP5O75197 1615 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 RANBP2P49792 3224 aaKnown RBP0.49□□□□□ -2.33
PHF3-211ENST00000514822 SYNJ1O43426 1573 aa0.49□□□□□ -2.33
PHF3-211ENST00000514822 CDK13Q14004 1512 aaKnown RBP0.48□□□□□ -2.33
PHF3-211ENST00000514822 GRIN2AQ12879 1464 aa0.48□□□□□ -2.33
PHF3-211ENST00000514822 ZNF518AQ6AHZ1 1483 aa0.48□□□□□ -2.33
PHF3-211ENST00000514822 LAMA3Q16787 3333 aa0.48□□□□□ -2.33
PHF3-211ENST00000514822 VIRMAQ69YN4 1812 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms