RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
SMARCAD1-205ENST00000506089 COMMD6Q7Z4G1 85 aa1.56□□□□□ -2.16
SMARCAD1-205ENST00000506089 TNS1Q9HBL0 1735 aaKnown RBP1.56□□□□□ -2.16
SMARCAD1-205ENST00000506089 SNRNP200O75643 2136 aaKnown RBP1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 KIAA0100Q14667 2235 aaKnown RBP1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 PHIPQ8WWQ0 1821 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 M0R143 59 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 UBE2D1P51668 147 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 CAV3P56539 151 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 DCDP81605 110 aaKnown RBP1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 TTC9CQ8N5M4 171 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 C5orf56Q8N8D9 126 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 BET1LQ9NYM9 111 aa1.55□□□□□ -2.16
SMARCAD1-205ENST00000506089 ARAP2Q8WZ64 1704 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 AKAP12Q02952 1782 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 CACNA1BQ00975 2339 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 HCG22E2RYF7 251 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 TMEM262E9PQX1 116 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 SIX6O95475 246 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 SSBP1Q04837 148 aaKnown RBP1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 ZNF56Q15929 161 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 CASKIN1Q8WXD9 1431 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 LRRC37A3O60309 1634 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 DOCK2Q92608 1830 aa1.54□□□□□ -2.16
SMARCAD1-205ENST00000506089 H3BQ15 152 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 FXYD1O00168 92 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 CCL3L1P16619 93 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 PKIAP61925 76 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 TCHHQ07283 1943 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 KLKP1Q107X0 134 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 FAM74A4Q5TZK3 123 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 C10orf71Q711Q0 1435 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 FBN3Q75N90 2809 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 CCL19Q99731 98 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 CYP4F30PQ9H0H9 118 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 DPH3P1Q9H4G8 78 aa1.53□□□□□ -2.16
SMARCAD1-205ENST00000506089 DOCK1Q14185 1865 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 SHROOM2Q13796 1616 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 ARHGAP5Q13017 1502 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 ZNF609O15014 1411 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 TRBV7-1A0A0A6YYK4 115 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 RBAKDNA6NC62 111 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 S100A10P60903 97 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 Q86TA4 180 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 C20orf197Q8N268 126 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 MYOZ3Q8TDC0 251 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 LINC00208Q96KT6 92 aa1.52□□□□□ -2.17
SMARCAD1-205ENST00000506089 CC2D2AQ9P2K1 1620 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 PXDNQ92626 1479 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 MED13Q9UHV7 2174 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 PPIP5K1Q6PFW1 1433 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 TRBV30A0A0K0K1B3 111 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 ANGP03950 147 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 EFNA4P52798 201 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 NCMAPQ5T1S8 102 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 C10orf99Q6UWK7 81 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 COX7B2Q8TF08 81 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 ABCA3Q99758 1704 aa1.51□□□□□ -2.17
SMARCAD1-205ENST00000506089 ABCC10Q5T3U5 1492 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 ARFGEF1Q9Y6D6 1849 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 MED12Q93074 2177 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 ANKRD26Q9UPS8 1709 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 SPTBP11277 2137 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 ESPL1Q14674 2120 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 LINC00312Q9Y6C7 94 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 TTC37Q6PGP7 1564 aa1.5□□□□□ -2.17
SMARCAD1-205ENST00000506089 SCAPERQ9BY12 1400 aa1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 TOPAZ1Q8N9V7 1692 aa1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 ELOF1P60002 83 aaKnown RBP1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 TMEM14BQ9NUH8 114 aa1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 AP4S1Q9Y587 144 aa1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 SORL1Q92673 2214 aa1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 TECTAO75443 2155 aa1.49□□□□□ -2.17
SMARCAD1-205ENST00000506089 SCRIBQ14160 1630 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 A0A1W2PPM0 123 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 PRB1P04280 392 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 COL5A1-AS1Q5SY13 56 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 C10orf128Q5T292 105 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 V9GYV3 84 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 ASCC3Q8N3C0 2202 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 FYCO1Q9BQS8 1478 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 TET3O43151 1660 aa1.48□□□□□ -2.17
SMARCAD1-205ENST00000506089 MAP2P11137 1827 aaKnown RBP1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 ABCA4P78363 2273 aa1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 LOC285556D6RIA3 1793 aa1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 SIPA1L3O60292 1781 aaPredicted RBP1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 CLPSL1A2RUU4 121 aa1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 EDDM3BP56851 147 aa1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 Q6ZSA8 131 aa1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 TEX14Q8IWB6 1497 aa1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 NCOA6Q14686 2063 aaPredicted RBP1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 TROQ12816 1431 aaPredicted RBP1.47□□□□□ -2.17
SMARCAD1-205ENST00000506089 TANC1Q9C0D5 1861 aa1.46□□□□□ -2.18
SMARCAD1-205ENST00000506089 GAPVD1Q14C86 1478 aa1.46□□□□□ -2.18
SMARCAD1-205ENST00000506089 NAP1L6A6NFF2 107 aa1.46□□□□□ -2.18
SMARCAD1-205ENST00000506089 MPC2O95563 127 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms