RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 RPL23P62829 140 aaKnown RBP17.07■□□□□ 0.32
PVT1-201ENST00000504719 CT83Q5H943 113 aa17.07■□□□□ 0.32
PVT1-201ENST00000504719 CNFNQ9BYD5 112 aa17.07■□□□□ 0.32
PVT1-201ENST00000504719 OSTCQ9NRP0 149 aa17.07■□□□□ 0.32
PVT1-201ENST00000504719 NAT8Q9UHE5 227 aa17.07■□□□□ 0.32
PVT1-201ENST00000504719 A0A087WTM6 91 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 MGPP08493 103 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 TRGC1P0CF51 173 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 RPL36AP83881 106 aaKnown RBP17.06■□□□□ 0.32
PVT1-201ENST00000504719 IFITM2Q01629 132 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 TWIST1Q15672 202 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 RPL36ALQ969Q0 106 aaKnown RBP17.06■□□□□ 0.32
PVT1-201ENST00000504719 ISOC2Q96AB3 205 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 PGPEP1Q9NXJ5 209 aa17.06■□□□□ 0.32
PVT1-201ENST00000504719 APOBP04114 4563 aaKnown RBP17.06■□□□□ 0.32
PVT1-201ENST00000504719 ADIRFQ15847 76 aa17.05■□□□□ 0.32
PVT1-201ENST00000504719 TRBV7-3A0A075B6L6 115 aa17.04■□□□□ 0.32
PVT1-201ENST00000504719 IBA57-AS1B1ANH7 110 aa17.04■□□□□ 0.32
PVT1-201ENST00000504719 CLLU1Q5K131 121 aa17.04■□□□□ 0.32
PVT1-201ENST00000504719 C15orf54Q8N8G6 183 aa17.04■□□□□ 0.32
PVT1-201ENST00000504719 NEXN-AS1Q8NBZ9 246 aa17.04■□□□□ 0.32
PVT1-201ENST00000504719 PGLYRP4Q96LB8 373 aa17.04■□□□□ 0.32
PVT1-201ENST00000504719 OR10G8Q8NGN5 311 aa17.03■□□□□ 0.32
PVT1-201ENST00000504719 IGHV3-30P01768 117 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 IGHV3-33P01772 117 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 IGHV3-30-3P0DP02 117 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 IGHV3-30-5P0DP03 117 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 UBE2D3P61077 147 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 UBE2D2P62837 147 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 TSKUQ8WUA8 353 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 KRTAP4-5Q9BYR2 181 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 DPH3P1Q9H4G8 78 aa17.02■□□□□ 0.32
PVT1-201ENST00000504719 FUSP35637 526 aaKnown RBP eCLIP17.01■□□□□ 0.31
PVT1-201ENST00000504719 FOXA3P55318 350 aaPredicted RBP17.01■□□□□ 0.31
PVT1-201ENST00000504719 CDPF1Q6NVV7 123 aa17.01■□□□□ 0.31
PVT1-201ENST00000504719 V9GYV3 84 aa17.01■□□□□ 0.31
PVT1-201ENST00000504719 SUMO4Q6EEV6 95 aa17■□□□□ 0.31
PVT1-201ENST00000504719 GFRA4Q9GZZ7 299 aa17■□□□□ 0.31
PVT1-201ENST00000504719 A0A087WWC5 75 aa16.99■□□□□ 0.31
PVT1-201ENST00000504719 HIGD1CA8MV81 97 aa16.99■□□□□ 0.31
PVT1-201ENST00000504719 M0QY20 66 aa16.99■□□□□ 0.31
PVT1-201ENST00000504719 MAPKAPK5-AS1Q8N8E1 139 aa16.99■□□□□ 0.31
PVT1-201ENST00000504719 FAM231BA6NCW3 169 aa16.97■□□□□ 0.31
PVT1-201ENST00000504719 H7C1H1 209 aa16.97■□□□□ 0.31
PVT1-201ENST00000504719 BORCS7Q96B45 105 aa16.97■□□□□ 0.31
PVT1-201ENST00000504719 Q9HAA7 133 aa16.97■□□□□ 0.31
PVT1-201ENST00000504719 ABCA13Q86UQ4 5058 aa16.97■□□□□ 0.31
PVT1-201ENST00000504719 PSCAO43653 123 aa16.96■□□□□ 0.31
PVT1-201ENST00000504719 SMIM15Q7Z3B0 74 aa16.96■□□□□ 0.31
PVT1-201ENST00000504719 Q8N3U1 123 aa16.96■□□□□ 0.31
PVT1-201ENST00000504719 LRCOL1A6NCL2 159 aa16.95■□□□□ 0.3
PVT1-201ENST00000504719 LAGE3Q14657 143 aa16.95■□□□□ 0.3
PVT1-201ENST00000504719 A0A1B0GUT8 65 aa16.94■□□□□ 0.3
PVT1-201ENST00000504719 RASL11AQ6T310 242 aa16.93■□□□□ 0.3
PVT1-201ENST00000504719 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.93■□□□□ 0.3
PVT1-201ENST00000504719 NUP35Q8NFH5 326 aa16.93■□□□□ 0.3
PVT1-201ENST00000504719 DNAJC30Q96LL9 226 aa16.93■□□□□ 0.3
PVT1-201ENST00000504719 DAZ4Q86SG3 579 aaKnown RBP16.92■□□□□ 0.3
PVT1-201ENST00000504719 Q8N1X5 172 aa16.92■□□□□ 0.3
PVT1-201ENST00000504719 DAZ3Q9NR90 486 aaKnown RBP16.92■□□□□ 0.3
PVT1-201ENST00000504719 TRAV26-2A0A0B4J265 109 aa16.91■□□□□ 0.3
PVT1-201ENST00000504719 NAT8BQ9UHF3 227 aa16.91■□□□□ 0.3
PVT1-201ENST00000504719 TRBV6-8A0A0A6YYG3 113 aa16.9■□□□□ 0.3
PVT1-201ENST00000504719 GATD1Q8NB37 220 aa16.9■□□□□ 0.3
PVT1-201ENST00000504719 NIT2Q9NQR4 276 aa16.9■□□□□ 0.3
PVT1-201ENST00000504719 SMIM27A0A1W2PRY6 76 aa16.89■□□□□ 0.29
PVT1-201ENST00000504719 KRTAP10-1P60331 282 aa16.89■□□□□ 0.29
PVT1-201ENST00000504719 TM2D2Q9BX73 214 aa16.89■□□□□ 0.29
PVT1-201ENST00000504719 NIT1Q86X76 327 aa16.88■□□□□ 0.29
PVT1-201ENST00000504719 TRAV8-3A0A0A6YYJ7 113 aa16.87■□□□□ 0.29
PVT1-201ENST00000504719 RIGQ13278 110 aa16.87■□□□□ 0.29
PVT1-201ENST00000504719 NTM-AS1Q6ZSK4 140 aa16.87■□□□□ 0.29
PVT1-201ENST00000504719 TMEM191AQ9H0A3 160 aa16.87■□□□□ 0.29
PVT1-201ENST00000504719 URGCP-MRPS24S4R325 110 aa16.87■□□□□ 0.29
PVT1-201ENST00000504719 GCSHP23434 173 aa16.86■□□□□ 0.29
PVT1-201ENST00000504719 TMEM97Q5BJF2 176 aa16.86■□□□□ 0.29
PVT1-201ENST00000504719 Q8N814 137 aa16.86■□□□□ 0.29
PVT1-201ENST00000504719 NTN5Q8WTR8 489 aaPredicted RBP16.86■□□□□ 0.29
PVT1-201ENST00000504719 XGP55808 180 aa16.85■□□□□ 0.29
PVT1-201ENST00000504719 PNRC1Q12796 327 aaPredicted RBP16.85■□□□□ 0.29
PVT1-201ENST00000504719 UQCC3Q6UW78 93 aa16.85■□□□□ 0.29
PVT1-201ENST00000504719 FRZBQ92765 325 aa16.85■□□□□ 0.29
PVT1-201ENST00000504719 A0A087WX48 190 aa16.84■□□□□ 0.29
PVT1-201ENST00000504719 RPL39LQ96EH5 51 aaKnown RBP16.84■□□□□ 0.29
PVT1-201ENST00000504719 IGLV5-52A0A0A0MRZ9 124 aa16.83■□□□□ 0.28
PVT1-201ENST00000504719 TMEM262E9PQX1 116 aa16.83■□□□□ 0.28
PVT1-201ENST00000504719 CHCHD5Q9BSY4 110 aa16.83■□□□□ 0.28
PVT1-201ENST00000504719 CHCHD7Q9BUK0 85 aa16.83■□□□□ 0.28
PVT1-201ENST00000504719 PPP1R2P9O14990 202 aa16.82■□□□□ 0.28
PVT1-201ENST00000504719 KCNIP4Q6PIL6 250 aa16.82■□□□□ 0.28
PVT1-201ENST00000504719 TRBV25-1A0A075B6N4 114 aa16.81■□□□□ 0.28
PVT1-201ENST00000504719 WFDC2Q14508 124 aa16.81■□□□□ 0.28
PVT1-201ENST00000504719 AMN1Q8IY45 258 aa16.81■□□□□ 0.28
PVT1-201ENST00000504719 DEFB104AQ8WTQ1 72 aa16.81■□□□□ 0.28
PVT1-201ENST00000504719 RNF185Q96GF1 192 aa16.81■□□□□ 0.28
PVT1-201ENST00000504719 IGHV1-24A0A0C4DH33 117 aa16.8■□□□□ 0.28
PVT1-201ENST00000504719 TMEM218A2RU14 115 aa16.8■□□□□ 0.28
PVT1-201ENST00000504719 RAB4AP20338 218 aa16.8■□□□□ 0.28
PVT1-201ENST00000504719 COMMD7Q86VX2 200 aa16.8■□□□□ 0.28
PVT1-201ENST00000504719 KLK12Q9UKR0 248 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms