RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-220	ENST00000497957	NDUFA6	P56556	154 aa		11.22	□□□□□ -0.61
PTK7-220	ENST00000497957	OR10J3	Q5JRS4	329 aa		11.22	□□□□□ -0.61
PTK7-220	ENST00000497957	NEXN-AS1	Q8NBZ9	246 aa		11.22	□□□□□ -0.61
PTK7-220	ENST00000497957	PRKDC	P78527	4128 aa	Known RBP	11.21	□□□□□ -0.61
PTK7-220	ENST00000497957	RAB5B	P61020	215 aa		11.21	□□□□□ -0.61
PTK7-220	ENST00000497957		A0A0J9YY99	117 aa		11.2	□□□□□ -0.62
PTK7-220	ENST00000497957		F5H768	121 aa		11.2	□□□□□ -0.62
PTK7-220	ENST00000497957		K7EQD1	137 aa		11.2	□□□□□ -0.62
PTK7-220	ENST00000497957	C11orf45	Q8TAV5	145 aa		11.2	□□□□□ -0.62
PTK7-220	ENST00000497957	GAGE12J	A6NER3	117 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	PPBP	P02775	128 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	ATP5G1	P05496	136 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	IFI27	P40305	119 aa	Predicted RBP	11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	CRYBA4	P53673	196 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	GAGE1	Q13065	139 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	GAGE4	Q13068	117 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	GAGE5	Q13069	117 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	GAGE13	Q4V321	117 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	VSIG2	Q96IQ7	327 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	EDA2R	Q9HAV5	297 aa		11.19	□□□□□ -0.62
PTK7-220	ENST00000497957	IGLV2-18	A0A075B6J9	118 aa		11.18	□□□□□ -0.62
PTK7-220	ENST00000497957	IGHV3-38	A0A0C4DH36	116 aa		11.18	□□□□□ -0.62
PTK7-220	ENST00000497957	NIT2	Q9NQR4	276 aa		11.18	□□□□□ -0.62
PTK7-220	ENST00000497957	HHLA3	Q9XRX5	114 aa		11.18	□□□□□ -0.62
PTK7-220	ENST00000497957	TEX48	A0A1B0GUV7	120 aa		11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	NHLRC4	P0CG21	123 aa	Predicted RBP	11.17	□□□□□ -0.62
PTK7-220	ENST00000497957		Q0VG73	95 aa		11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	NIT1	Q86X76	327 aa		11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	ZNRF2	Q8NHG8	242 aa		11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	MAP1LC3A	Q9H492	121 aa		11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	COL7A1	Q02388	2944 aa		11.17	□□□□□ -0.62
PTK7-220	ENST00000497957	TRAV26-1	A0A087WT03	109 aa		11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	TRBV6-5	A0A0K0K1A5	114 aa		11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	SERF1A	O75920	110 aa		11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	POLR2K	P53803	58 aa	Known RBP	11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	SUMO2	P61956	95 aa	Known RBP	11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	TMEM70	Q9BUB7	260 aa		11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	SMIM2	Q9BVW6	85 aa		11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	ST20	Q9HBF5	79 aa		11.16	□□□□□ -0.62
PTK7-220	ENST00000497957	TRBV6-4	A0A1B0GX49	114 aa		11.15	□□□□□ -0.62
PTK7-220	ENST00000497957	SDHAF1	A6NFY7	115 aa		11.15	□□□□□ -0.62
PTK7-220	ENST00000497957	TCAP	O15273	167 aa		11.15	□□□□□ -0.62
PTK7-220	ENST00000497957	GYPE	P15421	78 aa		11.15	□□□□□ -0.62
PTK7-220	ENST00000497957	PMCHL1	Q16048	86 aa		11.15	□□□□□ -0.62
PTK7-220	ENST00000497957	RNASEK	Q6P5S7	137 aa	Known RBP	11.15	□□□□□ -0.62
PTK7-220	ENST00000497957	BAGE3	Q86Y29	109 aa		11.15	□□□□□ -0.62
PTK7-220	ENST00000497957		A0A096LPF7	62 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	PRSS47	A8MTI9	375 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957		H7C1H1	209 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	PAX4	O43316	350 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	CIDEA	O60543	219 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	LINC00694	P0DN24	101 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	RHOH	Q15669	191 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	PDZD11	Q5EBL8	140 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	PRO0255	Q9UI72	69 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	LAMTOR2	Q9Y2Q5	125 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	TNFRSF18	Q9Y5U5	241 aa		11.14	□□□□□ -0.63
PTK7-220	ENST00000497957	DEFB131B	A0A096LNP1	70 aa		11.13	□□□□□ -0.63
PTK7-220	ENST00000497957	UBE2D3	P61077	147 aa		11.13	□□□□□ -0.63
PTK7-220	ENST00000497957	SNRPE	P62304	92 aa	Known RBP	11.13	□□□□□ -0.63
PTK7-220	ENST00000497957	UBE2D2	P62837	147 aa		11.13	□□□□□ -0.63
PTK7-220	ENST00000497957		Q8N8P6	123 aa		11.13	□□□□□ -0.63
PTK7-220	ENST00000497957	PRSS3P2	Q8NHM4	247 aa		11.13	□□□□□ -0.63
PTK7-220	ENST00000497957	C20orf78	Q9BR46	151 aa		11.13	□□□□□ -0.63
PTK7-220	ENST00000497957	TSHB	P01222	138 aa		11.12	□□□□□ -0.63
PTK7-220	ENST00000497957	COA6	Q5JTJ3	125 aa	Known RBP	11.12	□□□□□ -0.63
PTK7-220	ENST00000497957	FAM19A2	Q8N3H0	131 aa		11.12	□□□□□ -0.63
PTK7-220	ENST00000497957	PRADC1	Q9BSG0	188 aa		11.12	□□□□□ -0.63
PTK7-220	ENST00000497957	TRBV10-1	A0A0K0K1A3	114 aa		11.11	□□□□□ -0.63
PTK7-220	ENST00000497957	RPL36A	P83881	106 aa	Known RBP	11.11	□□□□□ -0.63
PTK7-220	ENST00000497957	FA2H	Q7L5A8	372 aa		11.11	□□□□□ -0.63
PTK7-220	ENST00000497957	RPL36AL	Q969Q0	106 aa	Known RBP	11.11	□□□□□ -0.63
PTK7-220	ENST00000497957	DNAJC30	Q96LL9	226 aa		11.11	□□□□□ -0.63
PTK7-220	ENST00000497957	FBN3	Q75N90	2809 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957	TRBV7-3	A0A075B6L6	115 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957		A0A096LNJ9	63 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957	IFITM10	A6NMD0	228 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957	LINC00614	P0C842	121 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957	PMCH	P20382	165 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957	NTM-AS1	Q6ZSK4	140 aa		11.1	□□□□□ -0.63
PTK7-220	ENST00000497957	TRAV10	A0A0B4J240	114 aa		11.09	□□□□□ -0.63
PTK7-220	ENST00000497957	TRBV27	A0A0K0K1C4	114 aa		11.09	□□□□□ -0.63
PTK7-220	ENST00000497957	C5orf52	A6NGY3	159 aa		11.09	□□□□□ -0.63
PTK7-220	ENST00000497957	VCY	O14598	125 aa		11.09	□□□□□ -0.63
PTK7-220	ENST00000497957	PPP1R17	O96001	155 aa		11.09	□□□□□ -0.63
PTK7-220	ENST00000497957	RPL32	P62910	135 aa	Known RBP	11.09	□□□□□ -0.63
PTK7-220	ENST00000497957	LINC01546	A6NGU7	62 aa		11.08	□□□□□ -0.64
PTK7-220	ENST00000497957	S100A6	P06703	90 aa		11.08	□□□□□ -0.64
PTK7-220	ENST00000497957	LINC00173	Q6ZV60	143 aa		11.08	□□□□□ -0.64
PTK7-220	ENST00000497957	HIST3H2BB	Q8N257	126 aa		11.08	□□□□□ -0.64
PTK7-220	ENST00000497957	NXT2	Q9NPJ8	142 aa	Known RBP	11.08	□□□□□ -0.64
PTK7-220	ENST00000497957	IGHV1-24	A0A0C4DH33	117 aa		11.07	□□□□□ -0.64
PTK7-220	ENST00000497957		I3L3M4	83 aa		11.07	□□□□□ -0.64
PTK7-220	ENST00000497957	NUDT3	O95989	172 aa		11.06	□□□□□ -0.64
PTK7-220	ENST00000497957	ESD	P10768	282 aa		11.06	□□□□□ -0.64
PTK7-220	ENST00000497957	ATP6V0E2	Q8NHE4	81 aa		11.06	□□□□□ -0.64
PTK7-220	ENST00000497957	CHCHD1	Q96BP2	118 aa	Known RBP	11.06	□□□□□ -0.64
PTK7-220	ENST00000497957	CHCHD7	Q9BUK0	85 aa		11.06	□□□□□ -0.64
PTK7-220	ENST00000497957	AP5S1	Q9NUS5	200 aa		11.06	□□□□□ -0.64

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