RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
PTPN7-218ENST00000496197 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
PTPN7-218ENST00000496197 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
PTPN7-218ENST00000496197 C15orf53Q8NAA6 179 aa9.34□□□□□ -0.91
PTPN7-218ENST00000496197 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
PTPN7-218ENST00000496197 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
PTPN7-218ENST00000496197 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
PTPN7-218ENST00000496197 TRBV10-1A0A0K0K1A3 114 aa9.32□□□□□ -0.92
PTPN7-218ENST00000496197 S100A8P05109 93 aa9.32□□□□□ -0.92
PTPN7-218ENST00000496197 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
PTPN7-218ENST00000496197 SMCO4Q9NRQ5 59 aa9.32□□□□□ -0.92
PTPN7-218ENST00000496197 IGHV3-38A0A0C4DH36 116 aa9.31□□□□□ -0.92
PTPN7-218ENST00000496197 SRIP30626 198 aa9.31□□□□□ -0.92
PTPN7-218ENST00000496197 UBE2D3P61077 147 aa9.31□□□□□ -0.92
PTPN7-218ENST00000496197 UBE2D2P62837 147 aa9.31□□□□□ -0.92
PTPN7-218ENST00000496197 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
PTPN7-218ENST00000496197 ESRGQ1W209 222 aa9.31□□□□□ -0.92
PTPN7-218ENST00000496197 NRACQ8N912 160 aa9.31□□□□□ -0.92
PTPN7-218ENST00000496197 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
PTPN7-218ENST00000496197 D6R8Y8 96 aa9.3□□□□□ -0.92
PTPN7-218ENST00000496197 TCTAP57738 103 aa9.3□□□□□ -0.92
PTPN7-218ENST00000496197 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
PTPN7-218ENST00000496197 MRAP2Q96G30 205 aa9.3□□□□□ -0.92
PTPN7-218ENST00000496197 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
PTPN7-218ENST00000496197 H7C1H1 209 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 S100A1P23297 94 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
PTPN7-218ENST00000496197 KIAA1644Q3SXP7 199 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 NEGR1Q7Z3B1 354 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
PTPN7-218ENST00000496197 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 LINC00588Q9Y4M8 146 aa9.29□□□□□ -0.92
PTPN7-218ENST00000496197 NPYP01303 97 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 OR10J3Q5JRS4 329 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 COLCA2A8K830 154 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 HLA-DQA1P01909 254 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 CKS2P33552 79 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 FRZBQ92765 325 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
PTPN7-218ENST00000496197 TNFRSF18Q9Y5U5 241 aa9.28□□□□□ -0.92
PTPN7-218ENST00000496197 TRBV6-5A0A0K0K1A5 114 aa9.27□□□□□ -0.93
PTPN7-218ENST00000496197 NTM-AS1Q6ZSK4 140 aa9.27□□□□□ -0.93
PTPN7-218ENST00000496197 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
PTPN7-218ENST00000496197 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
PTPN7-218ENST00000496197 APCSP02743 223 aa9.26□□□□□ -0.93
PTPN7-218ENST00000496197 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
PTPN7-218ENST00000496197 LINC00476Q8WZB0 136 aa9.26□□□□□ -0.93
PTPN7-218ENST00000496197 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
PTPN7-218ENST00000496197 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
PTPN7-218ENST00000496197 POLR2KP53803 58 aaKnown RBP9.25□□□□□ -0.93
PTPN7-218ENST00000496197 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
PTPN7-218ENST00000496197 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
PTPN7-218ENST00000496197 ALMS1Q8TCU4 4167 aa9.25□□□□□ -0.93
PTPN7-218ENST00000496197 MT-ND6P03923 174 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
PTPN7-218ENST00000496197 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 COX19Q49B96 90 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 ST20Q9HBF5 79 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
PTPN7-218ENST00000496197 LY6G6CO95867 125 aa9.23□□□□□ -0.93
PTPN7-218ENST00000496197 PPBPP02775 128 aa9.23□□□□□ -0.93
PTPN7-218ENST00000496197 CCL18P55774 89 aa9.23□□□□□ -0.93
PTPN7-218ENST00000496197 DAZ4Q86SG3 579 aaKnown RBP9.23□□□□□ -0.93
PTPN7-218ENST00000496197 DAZ3Q9NR90 486 aaKnown RBP9.23□□□□□ -0.93
PTPN7-218ENST00000496197 MRPS16Q9Y3D3 137 aaKnown RBP9.23□□□□□ -0.93
PTPN7-218ENST00000496197 VPS13DQ5THJ4 4388 aa9.23□□□□□ -0.93
PTPN7-218ENST00000496197 TIRAPP58753 221 aa9.22□□□□□ -0.93
PTPN7-218ENST00000496197 LELP1Q5T871 98 aa9.22□□□□□ -0.93
PTPN7-218ENST00000496197 UBE2DNLQ8IWF7 75 aa9.22□□□□□ -0.93
PTPN7-218ENST00000496197 Q8N3U1 123 aa9.22□□□□□ -0.93
PTPN7-218ENST00000496197 ALKBH7Q9BT30 221 aaPredicted RBP9.22□□□□□ -0.93
PTPN7-218ENST00000496197 HYDINQ4G0P3 5121 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 IGLV2-18A0A075B6J9 118 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 TRBV6-8A0A0A6YYG3 113 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 TRBV27A0A0K0K1C4 114 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 PHOX2AO14813 284 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 TSHBP01222 138 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 RAB5AP20339 215 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 UPK3BQ9BT76 320 aa9.21□□□□□ -0.93
PTPN7-218ENST00000496197 LOC389332A0A1B0GUA5 103 aa9.21□□□□□ -0.94
PTPN7-218ENST00000496197 TRGC2P03986 189 aa9.21□□□□□ -0.94
PTPN7-218ENST00000496197 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
PTPN7-218ENST00000496197 SMIM2Q9BVW6 85 aa9.21□□□□□ -0.94
PTPN7-218ENST00000496197 LCE6AA0A183 80 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 I3L3M4 83 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 PPP1R17O96001 155 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 PMCHP20382 165 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 IQCJQ1A5X6 159 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 KMT2AQ03164 3969 aa9.2□□□□□ -0.94
PTPN7-218ENST00000496197 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
PTPN7-218ENST00000496197 COTL1Q14019 142 aa9.19□□□□□ -0.94
PTPN7-218ENST00000496197 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
PTPN7-218ENST00000496197 LAMTOR2Q9Y2Q5 125 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms