RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 ARFGEF3Q5TH69 2177 aa1.31□□□□□ -2.2
CLHC1-213ENST00000494539 CASKIN1Q8WXD9 1431 aa1.31□□□□□ -2.2
CLHC1-213ENST00000494539 FANCD2Q9BXW9 1451 aa1.31□□□□□ -2.2
CLHC1-213ENST00000494539 PRDM15P57071 1507 aaPredicted RBP1.3□□□□□ -2.2
CLHC1-213ENST00000494539 ADAMTS12P58397 1594 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 STRCP1A6NGW2 1772 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 TRAV12-3A0A0B4J271 114 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 TRBV10-3A0A0K0K1G6 114 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 HIGD1CA8MV81 97 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 H3BQ15 152 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 HCRTO43612 131 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 SSSCA1O60232 199 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 DNAL4O96015 105 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 CCL8P80075 99 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 DEFB103AP81534 67 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 COMMD6Q7Z4G1 85 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 C10orf82Q8WW14 230 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 SMCO4Q9NRQ5 59 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 BET1LQ9NYM9 111 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 PLXNA2O75051 1894 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 ABCC2Q92887 1545 aa1.3□□□□□ -2.2
CLHC1-213ENST00000494539 KIAA0100Q14667 2235 aaKnown RBP1.3□□□□□ -2.2
CLHC1-213ENST00000494539 SIP14410 1827 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 RBAKDNA6NC62 111 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 HCG22E2RYF7 251 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 PDCD5O14737 125 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 IGLC1P0CG04 106 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 SNCAP37840 140 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
CLHC1-213ENST00000494539 PEA15Q15121 130 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 SPATA45Q537H7 98 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 PCOTHQ58A44 107 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 DEFB132Q7Z7B7 95 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 KRTAP4-1Q9BYQ7 146 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 PRO1933Q9H354 126 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 C10orf71Q711Q0 1435 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 ERVK-7P63135 1459 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 LMTK2Q8IWU2 1503 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 VWDEQ8N2E2 1590 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 GBF1Q92538 1859 aa1.29□□□□□ -2.2
CLHC1-213ENST00000494539 INTS1Q8N201 2190 aaKnown RBP1.28□□□□□ -2.2
CLHC1-213ENST00000494539 SPAG17Q6Q759 2223 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 TRAV13-2A0A0B4J235 113 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 SIX6O95475 246 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 APOC3P02656 99 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 HMGN3Q15651 99 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 GDF5OSQ5U4N7 250 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 ZNF818PQ6ZRF7 136 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 ZNF720Q7Z2F6 126 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 AMELYQ99218 206 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 VAMP8Q9BV40 100 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 UQCR10Q9UDW1 63 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 RABAC1Q9UI14 185 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 HFM1A2PYH4 1435 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 GOLGA3Q08378 1498 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 RBBP6Q7Z6E9 1792 aaKnown RBP1.28□□□□□ -2.2
CLHC1-213ENST00000494539 TNRC6AQ8NDV7 1962 aaKnown RBP1.28□□□□□ -2.2
CLHC1-213ENST00000494539 EXPH5Q8NEV8 1989 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 SDK1Q7Z5N4 2213 aa1.28□□□□□ -2.2
CLHC1-213ENST00000494539 LAMB1P07942 1786 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 ZC3H13Q5T200 1668 aaKnown RBP1.27□□□□□ -2.21
CLHC1-213ENST00000494539 EPRSP07814 1512 aaKnown RBP1.27□□□□□ -2.21
CLHC1-213ENST00000494539 MAGI3Q5TCQ9 1506 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 MLH3Q9UHC1 1453 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 PLIN4Q96Q06 1357 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 GYPAP02724 150 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 MT-ATP8P03928 68 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 ASIPP42127 132 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 FXYD4P59646 89 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 DEFA5Q01523 94 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 Q0VG73 95 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 Q5BKY6 102 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 ZNF563Q8TA94 476 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 CYP4F30PQ9H0H9 118 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 LINC00474Q9P2X8 69 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 LINC00312Q9Y6C7 94 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 ZGRF1Q86YA3 2104 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 PTPRDP23468 1912 aa1.27□□□□□ -2.21
CLHC1-213ENST00000494539 MUC22E2RYF6 1773 aaPredicted RBP1.26□□□□□ -2.21
CLHC1-213ENST00000494539 CTTNBP2Q8WZ74 1663 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 ROBO1Q9Y6N7 1651 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 ARHGAP5Q13017 1502 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 PXDNQ92626 1479 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 MUC6Q6W4X9 2439 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 A0A087WXM4 84 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 TEX49A0A1B0GTD5 131 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 LOC101927531A0A1B0GV80 90 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 IL9P15248 144 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 UBE2D1P51668 147 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 SPHKAPQ2M3C7 1700 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 PREX2Q70Z35 1606 aa1.26□□□□□ -2.21
CLHC1-213ENST00000494539 SNRNP200O75643 2136 aaKnown RBP1.25□□□□□ -2.21
CLHC1-213ENST00000494539 TET1Q8NFU7 2136 aa1.25□□□□□ -2.21
CLHC1-213ENST00000494539 NCOA2Q15596 1464 aa1.25□□□□□ -2.21
CLHC1-213ENST00000494539 IQSEC2Q5JU85 1478 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms