RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SMIM17P0DL12 118 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 NTF3P20783 257 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 HBBP68871 147 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 LGALS9BQ3B8N2 356 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 WDR73Q6P4I2 378 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 Q6ZTI0 123 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 APLNQ9ULZ1 77 aa8.59□□□□□ -1.03
UPF3A-210ENST00000493727 A0A1B0GW15 77 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 NXPH4O95158 308 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 S100A8P05109 93 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 GCSHP23434 173 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 CAMPP49913 170 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 DAD1P61803 113 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 PTH2Q96A98 100 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 NDUFAF3Q9BU61 184 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 CNFNQ9BYD5 112 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
UPF3A-210ENST00000493727 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 TGIF2-C20orf24A0A0A6YYL0 155 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 A8MWV9 139 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 RAB4BP61018 213 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 ELOBQ15370 118 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 PIK3CD-AS1Q5SR53 167 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 FAM74A4Q5TZK3 123 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 OR4C5Q8NGB2 326 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 RASL10AQ92737 203 aa8.57□□□□□ -1.04
UPF3A-210ENST00000493727 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
UPF3A-210ENST00000493727 MGPP08493 103 aa8.56□□□□□ -1.04
UPF3A-210ENST00000493727 Q6ZTC4 211 aa8.56□□□□□ -1.04
UPF3A-210ENST00000493727 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
UPF3A-210ENST00000493727 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
UPF3A-210ENST00000493727 A0A087WWL8 130 aa8.55□□□□□ -1.04
UPF3A-210ENST00000493727 IGHV3-73A0A0B4J1V6 119 aa8.55□□□□□ -1.04
UPF3A-210ENST00000493727 TRAV4A0A0B4J268 109 aa8.55□□□□□ -1.04
UPF3A-210ENST00000493727 RS1O15537 224 aa8.55□□□□□ -1.04
UPF3A-210ENST00000493727 FAM210BQ96KR6 192 aa8.55□□□□□ -1.04
UPF3A-210ENST00000493727 JPT2Q9H910 190 aa8.55□□□□□ -1.04
UPF3A-210ENST00000493727 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 DEFB131BA0A096LNP1 70 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 A0A1B0GVY2 172 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 A0A1B0GXF2 115 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 RHODO00212 210 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 SLPIP03973 132 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 EVI2AP22794 236 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 ZNF56Q15929 161 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 RASL11AQ6T310 242 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 LINC00612Q8N6U2 182 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
UPF3A-210ENST00000493727 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 TRGV4A0A0C4DH28 118 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 F5H697 171 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 P0DMU3 169 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 FAM231AP0DMU4 169 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 FAM231CP0DMU5 169 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 HTN3P15516 51 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 COX19Q49B96 90 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 LINC00336Q6ZUF6 198 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 ZNF479Q96JC4 524 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 SAMD10Q9BYL1 202 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 TMEM191AQ9H0A3 160 aa8.53□□□□□ -1.04
UPF3A-210ENST00000493727 CIDEAO60543 219 aa8.52□□□□□ -1.05
UPF3A-210ENST00000493727 ATP5G1P05496 136 aa8.52□□□□□ -1.05
UPF3A-210ENST00000493727 MALP21145 153 aa8.52□□□□□ -1.05
UPF3A-210ENST00000493727 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.52□□□□□ -1.05
UPF3A-210ENST00000493727 YPEL4Q96NS1 127 aa8.52□□□□□ -1.05
UPF3A-210ENST00000493727 F5H768 121 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 MT-ND6P03923 174 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 CRYGDP07320 174 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 ZFP2Q6ZN57 461 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 AMN1Q8IY45 258 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 POM121L12Q8N7R1 296 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 FRZBQ92765 325 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 GNB1LQ9BYB4 327 aa8.51□□□□□ -1.05
UPF3A-210ENST00000493727 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
UPF3A-210ENST00000493727 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
UPF3A-210ENST00000493727 TMEM136Q6ZRR5 245 aa8.5□□□□□ -1.05
UPF3A-210ENST00000493727 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
UPF3A-210ENST00000493727 COLCA2A8K830 154 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 APCSP02743 223 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 FHL2Q14192 279 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 TRAPPC1Q9Y5R8 145 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
UPF3A-210ENST00000493727 H7C1H1 209 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 K7EQD1 137 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 GATA1P15976 413 aaPredicted RBP8.48□□□□□ -1.05
UPF3A-210ENST00000493727 RAB4AP20338 218 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 RAB5AP20339 215 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 CKS2P33552 79 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 SLAQ13239 276 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
UPF3A-210ENST00000493727 UFSP1Q6NVU6 142 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
UPF3A-210ENST00000493727 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms