RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RBMY1DP0C7P1 496 aaKnown RBP6.93□□□□□ -1.3
BRCA1-219ENST00000491747 PLNP26678 52 aa6.93□□□□□ -1.3
BRCA1-219ENST00000491747 SPAG8Q99932 426 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-219ENST00000491747 IGKV3D-20A0A0C4DH25 116 aa6.92□□□□□ -1.3
BRCA1-219ENST00000491747 PRAC2D3DTV9 90 aa6.92□□□□□ -1.3
BRCA1-219ENST00000491747 K7ERJ3 54 aa6.92□□□□□ -1.3
BRCA1-219ENST00000491747 GATA1P15976 413 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-219ENST00000491747 TMEM78Q5T7P6 136 aa6.92□□□□□ -1.3
BRCA1-219ENST00000491747 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-219ENST00000491747 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
BRCA1-219ENST00000491747 F8W1H4 67 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 J3QR89 54 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 ODF3L2Q3SX64 289 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 RNF182Q8N6D2 247 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 METTL26Q96S19 204 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 A0A087WX48 190 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 TEX48A0A1B0GUV7 120 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 E9PLD3 99 aa6.91□□□□□ -1.3
BRCA1-219ENST00000491747 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-219ENST00000491747 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
BRCA1-219ENST00000491747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-219ENST00000491747 SPANXN1Q5VSR9 72 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 NRACQ8N912 160 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 ZNF479Q96JC4 524 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 AGPAT4-IT1Q9H0P7 198 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 TENM3Q9P273 2699 aa6.9□□□□□ -1.3
BRCA1-219ENST00000491747 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.31
BRCA1-219ENST00000491747 GLMPQ8WWB7 406 aa6.9□□□□□ -1.31
BRCA1-219ENST00000491747 IGLL5B9A064 214 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 F8VRH5 84 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 APRG1Q8IVJ8 170 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 HIST1H4GQ99525 98 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 TRAV26-2A0A0B4J265 109 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 H7C1H1 209 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 RPL11P62913 178 aaKnown RBP6.89□□□□□ -1.31
BRCA1-219ENST00000491747 C12orf74Q32Q52 190 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 RETNQ9HD89 108 aa6.89□□□□□ -1.31
BRCA1-219ENST00000491747 SCGB1A1P11684 91 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 MAP6D1Q9H9H5 199 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 K7EMI3 77 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 K7EQG2 157 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 OR11H2Q8NH07 326 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 DCANP1Q8TF63 244 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 SMIM2Q9BVW6 85 aa6.88□□□□□ -1.31
BRCA1-219ENST00000491747 NBEAL2Q6ZNJ1 2754 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 FAM110AQ9BQ89 295 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 SPANXB1Q9NS25 103 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-219ENST00000491747 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 H3BMG7 143 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 CIDEAO60543 219 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 CHTOPQ9Y3Y2 248 aaKnown RBP6.87□□□□□ -1.31
BRCA1-219ENST00000491747 LENEPQ9Y5L5 61 aa6.87□□□□□ -1.31
BRCA1-219ENST00000491747 AGRNO00468 2067 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 H3BVH4 76 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 DEFB131AP59861 70 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
BRCA1-219ENST00000491747 WFDC2Q14508 124 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 RRN3P1Q2M238 152 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 A0A1B0GWB2 263 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 RPL35AP18077 110 aaKnown RBP6.86□□□□□ -1.31
BRCA1-219ENST00000491747 AZU1P20160 251 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 GAGE13Q4V321 117 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 C16orf92Q96LL3 132 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
BRCA1-219ENST00000491747 ZNF688P0C7X2 276 aa6.85□□□□□ -1.31
BRCA1-219ENST00000491747 GTSF1LQ9H1H1 148 aa6.85□□□□□ -1.31
BRCA1-219ENST00000491747 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 A6NJY4 79 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 WWC2-AS2Q96NR7 200 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 PPP1R17O96001 155 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 S100A4P26447 101 aaKnown RBP6.84□□□□□ -1.31
BRCA1-219ENST00000491747 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-219ENST00000491747 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 AMTNQ6UX39 209 aa6.84□□□□□ -1.31
BRCA1-219ENST00000491747 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 KNCNA6PVL3 124 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 M0R381 172 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 LINC00477Q96M19 166 aa6.83□□□□□ -1.32
BRCA1-219ENST00000491747 OVOL2Q9BRP0 275 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms