RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 KRTAP1-1Q07627 177 aa13.46□□□□□ -0.25
EXD3-212ENST00000491734 SRSF9Q13242 221 aaKnown RBP eCLIP13.46□□□□□ -0.25
EXD3-212ENST00000491734 APRG1Q8IVJ8 170 aa13.46□□□□□ -0.25
EXD3-212ENST00000491734 PPDPFLQ8WWR9 84 aa13.46□□□□□ -0.25
EXD3-212ENST00000491734 NXPH4O95158 308 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 SYNJ2BPP57105 145 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 C18orf65Q6ZTR6 163 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 NDUFA11Q86Y39 141 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 PHLDA3Q9Y5J5 127 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 TRBV7-9A0A0J9YWB2 115 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 A0A0J9YY99 117 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 HERVK_113P61574 105 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 TEN1Q86WV5 123 aa13.45□□□□□ -0.26
EXD3-212ENST00000491734 C14orf178Q8N769 122 aaPredicted RBP13.45□□□□□ -0.26
EXD3-212ENST00000491734 IGLV4-69A0A075B6H9 119 aa13.44□□□□□ -0.26
EXD3-212ENST00000491734 PSMB2P49721 201 aa13.44□□□□□ -0.26
EXD3-212ENST00000491734 S100A4P26447 101 aaKnown RBP13.44□□□□□ -0.26
EXD3-212ENST00000491734 DCANP1Q8TF63 244 aa13.44□□□□□ -0.26
EXD3-212ENST00000491734 HECTD1Q9ULT8 2610 aa13.43□□□□□ -0.26
EXD3-212ENST00000491734 IGIPA6NJ69 53 aa13.43□□□□□ -0.26
EXD3-212ENST00000491734 HIST2H2BDQ6DRA6 164 aa13.43□□□□□ -0.26
EXD3-212ENST00000491734 ZFP2Q6ZN57 461 aa13.43□□□□□ -0.26
EXD3-212ENST00000491734 Q8N2B8 174 aa13.43□□□□□ -0.26
EXD3-212ENST00000491734 UBE2E2Q96LR5 201 aa13.43□□□□□ -0.26
EXD3-212ENST00000491734 LOC107984156A0A0G2JMH3 177 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 TSHBP01222 138 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 ARL17AQ8IVW1 177 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 TMEM86BQ8N661 226 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 TMEM141Q96I45 108 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 C11orf86A6NJI1 115 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 M0QXV9 152 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 SPINK8P0C7L1 97 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
EXD3-212ENST00000491734 Q6ZUT4 128 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 SVIPQ8NHG7 77 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 CARD19Q96LW7 228 aa13.42□□□□□ -0.26
EXD3-212ENST00000491734 GEMIN7Q9H840 131 aaKnown RBP13.42□□□□□ -0.26
EXD3-212ENST00000491734 AKAP9Q99996 3911 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 IGHV3-30P01768 117 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 IGHV3-30-5P0DP03 117 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 PMVKQ15126 192 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 DEFB136Q30KP8 78 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 ANXA2RQ3ZCQ2 193 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 RNF152Q8N8N0 203 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 SLC25A29Q8N8R3 303 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 KIF25-AS1Q9Y6Z4 181 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 DUSP14O95147 198 aaKnown RBP13.41□□□□□ -0.26
EXD3-212ENST00000491734 RNASE4P34096 147 aaKnown RBP13.41□□□□□ -0.26
EXD3-212ENST00000491734 FHL3Q13643 280 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 KLHL30-AS1Q8NEE0 82 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 TIMM17AQ99595 171 aa13.41□□□□□ -0.26
EXD3-212ENST00000491734 MGPP08493 103 aa13.4□□□□□ -0.26
EXD3-212ENST00000491734 RNASE3P12724 160 aaKnown RBP13.4□□□□□ -0.26
EXD3-212ENST00000491734 LINC00315P59091 139 aa13.4□□□□□ -0.26
EXD3-212ENST00000491734 WFDC12Q8WWY7 111 aa13.4□□□□□ -0.26
EXD3-212ENST00000491734 SPRY2O43597 315 aa13.39□□□□□ -0.27
EXD3-212ENST00000491734 POLR2KP53803 58 aaKnown RBP13.39□□□□□ -0.27
EXD3-212ENST00000491734 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
EXD3-212ENST00000491734 SONP18583 2426 aaKnown RBP13.39□□□□□ -0.27
EXD3-212ENST00000491734 TCL1BO95988 128 aa13.39□□□□□ -0.27
EXD3-212ENST00000491734 CFC1BP0CG36 223 aa13.39□□□□□ -0.27
EXD3-212ENST00000491734 CFC1P0CG37 223 aa13.39□□□□□ -0.27
EXD3-212ENST00000491734 ID1P41134 155 aa13.39□□□□□ -0.27
EXD3-212ENST00000491734 A8MWV9 139 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 MT-ATP8P03928 68 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 SLURP1P55000 103 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 XGP55808 180 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 LGALS9O00182 355 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 TP53TG1Q9Y2A0 90 aa13.38□□□□□ -0.27
EXD3-212ENST00000491734 TRAV26-1A0A087WT03 109 aa13.37□□□□□ -0.27
EXD3-212ENST00000491734 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
EXD3-212ENST00000491734 AMELXQ99217 191 aa13.37□□□□□ -0.27
EXD3-212ENST00000491734 VCYO14598 125 aa13.37□□□□□ -0.27
EXD3-212ENST00000491734 ACANP16112 2415 aa13.36□□□□□ -0.27
EXD3-212ENST00000491734 DNAJC9-AS1A6NH13 148 aa13.36□□□□□ -0.27
EXD3-212ENST00000491734 TMEM262E9PQX1 116 aa13.36□□□□□ -0.27
EXD3-212ENST00000491734 ZNF876PQ49A33 203 aa13.36□□□□□ -0.27
EXD3-212ENST00000491734 PTH2Q96A98 100 aa13.36□□□□□ -0.27
EXD3-212ENST00000491734 PRO1854Q9UHT4 67 aa13.36□□□□□ -0.27
EXD3-212ENST00000491734 K7EQG2 157 aa13.35□□□□□ -0.27
EXD3-212ENST00000491734 Q6ZSV7 163 aa13.35□□□□□ -0.27
EXD3-212ENST00000491734 YAE1D1Q9NRH1 226 aa13.35□□□□□ -0.27
EXD3-212ENST00000491734 GNRH2O43555 120 aa13.35□□□□□ -0.27
EXD3-212ENST00000491734 TSPEAR-AS2P59090 65 aa13.35□□□□□ -0.27
EXD3-212ENST00000491734 ESM1Q9NQ30 184 aa13.35□□□□□ -0.27
EXD3-212ENST00000491734 TRBV6-5A0A0K0K1A5 114 aa13.34□□□□□ -0.27
EXD3-212ENST00000491734 KHDC1LQ5JSQ8 128 aa13.34□□□□□ -0.27
EXD3-212ENST00000491734 KIR2DL4Q99706 377 aa13.34□□□□□ -0.27
EXD3-212ENST00000491734 IGKV3-20P01619 116 aa13.34□□□□□ -0.27
EXD3-212ENST00000491734 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
EXD3-212ENST00000491734 SFTA2Q6UW10 78 aa13.33□□□□□ -0.28
EXD3-212ENST00000491734 LINC01600Q96MT4 127 aa13.33□□□□□ -0.28
EXD3-212ENST00000491734 ERG28Q9UKR5 140 aa13.33□□□□□ -0.28
EXD3-212ENST00000491734 KLLNB2CW77 178 aa13.32□□□□□ -0.28
EXD3-212ENST00000491734 J3QQQ9 107 aa13.32□□□□□ -0.28
EXD3-212ENST00000491734 SUMO4Q6EEV6 95 aa13.32□□□□□ -0.28
EXD3-212ENST00000491734 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms